Lytechinus pictus (painted urchin): 129254666
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Entry
129254666 CDS
T09066
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04140
Autophagy - animal
lpic04142
Lysosome biogenesis
lpic04145
Phagocytosis
lpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129254666
04142 Lysosome biogenesis
129254666
04140 Autophagy - animal
129254666
04148 Efferocytosis
129254666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129254666
Membrane trafficking [BR:
lpic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129254666
Hops complex
129254666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
TPR_Vps41
zf-RING_5
zf-RING_2
zf-RING_11
zf-RING_16
zf-RING_Vps41
zf-C3HC4_2
zf-ANAPC11
zf-rbx1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129254666
NCBI-ProteinID:
XP_054749145
LinkDB
All DBs
Position
2:66649028..66680642
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AA seq
979 aa
AA seq
DB search
MSSIFDQYEQATARAASSIPHPLPKESAPISSGYVSASLEEDVRIFTRNRINFQPPKAIT
HMVVNNNILIIAMKDHQLLRIDREHPEQPDEVKVGDDPVHHLFLDPTGRHLLISTEAQEV
FYLSRNSKKCKNLTKFKGHLIDSVGWNKSNTSDTSTSEILLGTSQGLIYEAEIQAGEDSR
FFQQSLDQYFKQVFSLGKEGTVPVTAIEVERIPSSKAGEKARFFVMATTPGRLYQFVGTV
PAQADTPIFLNVFQKYEDITPSFLELPGNFGYSKLEQYCPKARGLPKTFAWMTGPGVYFG
SFDFNSQSRDNLTCDSHLLPYPTRDQESFVRPISVVLTEFHVLLLFQDRIKILCVLNEQL
IDEDIFTQPRSGRLMGLCRDRIKGAIWLYTDQSVFMYKIVREARDVWRIYLDKGDFDRAK
EFVRDNPAHLDQVMSRQAEHFFDIQKYEKSAMYYAMTEKSFEEISLKFIEAKQTDALKVF
LMKKLGALKTEDKTQLTMLVMWLIELNLNQLGAARGKADQQTRFKEQQVEFQKFLATTRV
KDCLSSNVNTVYDLIASHGDVENMVYFAMLMQDYERVIRHHIQNEDYTAVLGVLRKPTNS
AALFYKFSPVLMQHIPNDLVSAWLEQGKALEAKKLIPSLVQCDSGPSEKQVLEAIRYLEF
CIKKLGNKEQAIHNYLLSLYCQHQPSNLMGYLAAQGEIADNVNYDVKYALRLCAERKHFK
ACVHIYTTMGLYEEAVDLALQVDVDLAKQSAEKPEDDEALRRKLWLRIAKHVVSEKNDIK
KAMAVLHECPLLKIEDILPFFPDFVTIDHFKDAICSSLADYNQHIEALKADMEDASESAK
ALRADIQETRNKYGIVSGQQKCASCTYPLLTRSFYLFPCEHMFHSDCLITEVQPHLTPSK
RIRISEIQSQLTTLHGQRPQSSAASTEGATKREEIDRLRNELDDIVAAECVYCGEIMIRS
IDKPFIDHDEYEAVIKSWE
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctatctttgatcagtatgagcaggctactgcacgggctgcatccagtatccct
catcctttacccaaagagtctgctccgatctcatcaggttatgtctctgcatctttggag
gaagatgtccgcattttcacaaggaacaggatcaatttccagcctcctaaagctataacc
cacatggtggtaaacaacaatatcttgattattgcaatgaaagatcatcagttacttagg
attgatagggaacatccagaacaacctgatgaggtcaaagtaggagacgatcctgttcat
catctgttcctagatcccacagggcgtcatctgctgatcagcaccgaagcacaagaagtc
ttctatctctctaggaatagcaagaaatgcaagaatctaaccaagttcaagggtcatttg
attgactcagttggttggaacaagtcgaacacgagtgatacatcaacctctgaaattctt
ctaggcacaagtcaaggtttgatatatgaagctgaaatccaagctggagaggatagtcga
ttctttcaacagagcttagatcagtatttcaaacaggtgtttagtcttggtaaagaaggt
accgtcccggtgacagcgattgaagtagaacgtataccatcttctaaagcaggagagaag
gctagattctttgtcatggcaaccacaccaggacgattgtaccagttcgttgggaccgtt
ccagctcaagcagatacacccatctttttaaatgtctttcagaagtacgaggacatcaca
ccaagtttcttggagttaccaggcaactttggatacagtaaacttgagcagtactgccct
aaggctcgaggattacccaagacgtttgcttggatgacaggtcctggagtttactttggt
agttttgacttcaatagccagtctagagacaatcttacctgtgacagtcatctattgcca
tacccaacgagagatcaagagagctttgtcagacctatctcagtggtccttactgaattc
catgttctactactcttccaagacagaataaagatcctgtgtgtcttgaatgaacaactc
attgatgaagacattttcactcagcctaggtcgggtcgtctcatggggctatgcagagat
agaatcaagggtgcaatatggctgtacacagaccaatcagtcttcatgtataagattgtc
agagaagcgagagatgtgtggaggatatatctggataagggtgactttgatcgtgctaaa
gagtttgtccgggataaccctgcacacctagaccaagtcatgagcagacaagctgaacac
ttctttgacattcaaaagtatgagaaaagtgccatgtattatgccatgactgagaagtcc
tttgaagagatatctctgaagttcattgaagcaaagcagactgatgctctcaaagtcttc
cttatgaagaagcttggagcactcaagactgaggataagacccagttgacaatgttagta
atgtggctgatagaactcaatctcaatcagttaggagcagcacgaggtaaagctgatcag
caaacaaggttcaaagaacaacaagttgaattccagaaattcctggctaccaccagggtc
aaggattgtctgagcagcaatgtaaacacagtgtatgatctgattgctagtcatggtgat
gtagagaatatggtctactttgcaatgctcatgcaagattacgagagagtgatccggcat
cacattcagaacgaggactatactgcggtgcttggagtcctgaggaaaccgaccaacagt
gcagctctcttctacaagttctcaccggtcctgatgcaacacatcccaaatgacctggtt
tcggcatggcttgagcaaggcaaggcattggaagcaaagaagctcatcccatccttggta
cagtgcgacagtggaccatccgagaagcaggtcctggaggctatccgttatcttgagttc
tgtatcaagaagcttggaaacaaagaacaagccattcacaactatctcttgtctctctac
tgtcaacatcaaccatcaaacctgatgggatacttggctgctcaaggagagattgctgat
aatgtgaactatgacgtgaagtacgcattgaggctgtgtgctgaacgtaagcatttcaag
gcctgtgttcacatttacactacaatgggtctctatgaggaagctgtagatttagcattg
caggttgatgtagacttggctaaacaaagcgctgagaagcctgaagacgatgaagctctg
aggcgcaaactctggctgcgcattgccaaacacgtcgtctctgagaagaacgatatcaag
aaagccatggctgtgcttcatgaatgtcctctgctgaagattgaggatatcctacccttc
ttcccagactttgtaaccattgaccatttcaaggatgccatctgtagttctctagctgat
tacaatcagcatatagaagcattgaaagctgatatggaggatgcatcggagagtgcaaag
gcattgagagctgacatccaagagacaaggaacaagtatggtattgtgagcggtcagcaa
aagtgtgcctcctgtacctaccccctcctaacccgatcgttttatctcttcccttgtgag
catatgttccattcagactgtcttatcacagaggtccaacctcatctgacaccatccaag
agaatacgcatcagtgagatccaatcacagctcaccaccctacacggacagcgccctcag
agttcagcggcatctacggagggcgccaccaagagggaggagatagacaggttacggaat
gaacttgatgatatcgtagctgcagagtgtgtatactgtggagagatcatgatcaggtct
attgataagccgttcatagaccatgatgaatatgaagccgtcatcaagagctgggaatga
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