Lytechinus pictus (painted urchin): 129254675
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Entry
129254675 CDS
T09066
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
lpic03440
Homologous recombination
lpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129254675
03420 Nucleotide excision repair
129254675
03430 Mismatch repair
129254675
03440 Homologous recombination
129254675
03460 Fanconi anemia pathway
129254675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpic03000
]
129254675
03032 DNA replication proteins [BR:
lpic03032
]
129254675
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129254675
Transcription factors [BR:
lpic03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129254675
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129254675
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129254675
MMR (mismatch excision repair)
129254675
DSBR (double strand breaks repair)
HR (homologous recombination)
129254675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
HROB
Motif
Other DBs
NCBI-GeneID:
129254675
NCBI-ProteinID:
XP_054749157
LinkDB
All DBs
Position
2:complement(67236065..67256440)
Genome browser
AA seq
626 aa
AA seq
DB search
MNNLLTRGAIAAIFQEKVVSCPVLQLLACKKMNAASSGKAVDRYRLMLSDGEHTCTAMLA
TQLNEMVSTGKLDVQAAMKLNNYSCNQIANDRRVIVVLDLDIVKKGSEIGMTIGTPSPMR
APGQGAGPGPVQQQSRPDSTVSHEAPQAARPTSYGTGAAPSNSRPNGNKQQGSFYGQSNQ
ATGSNTSPKKVHPISSLTPYQNRWTIKVRVTNKSKIRTWSNARGEGKLFSMDLSDQSGEI
RCTAFKDTVDKYYDMIEIGKIYFVSRGTLKPANRQYTSINNDYELTFNNDTMVEPCVEED
VSIPAVQFDFKSIAHLEDTAEDSMIDVIGVCKSTSDLASVTIKSSNREVNKRSIQLVDDS
QKEVSLTLWGKEAEEFDGSGNPVIAVKGARLSGFGGRSLSVLQSSIFQVNPDIPKAHHLK
GWFDSEGHSQDSQSISSKMGGGGGSNTNWLNFHDVHAQNLGQGEKPDYFTVKGTILFVRK
ENCMYMACPSAECNKKVSENGDGSYRCEKCAKDFEGFKYRLLLSANVADATDNQWITCFQ
ETAEQLLNKQAQELGSLKDQGEATEREFNQVFQDACFNDYMFKMRIKMETYNEEARLKCT
CVNAQPINVRDYTKKLINDIRLMASA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttgctaaccagaggagccattgcggccattttccaagaaaaagttgtcagt
tgccctgtattacagcttctggcttgtaagaagatgaatgcagcatccagtggtaaagct
gtggatcgttatcgtcttatgctctcagatggagagcatacatgcacagccatgttggct
acacagctcaatgagatggtttcaacaggaaagcttgatgtccaagctgctatgaaactc
aataattactcctgcaatcaaattgctaatgacaggcgagtcattgtggtcttggatctg
gacattgtgaagaaaggaagcgaaattggtatgacgatcggtaccccttcaccgatgaga
gctccaggacagggagcaggacctggaccagttcagcagcagtccagacctgatagtaca
gtgagtcatgaagcaccccaagcagccagacctaccagctatggaacaggagccgctcca
tctaactcaagacctaatggtaacaaacaacaaggttcattctatggtcagtcaaaccag
gctacggggagtaacacttcaccaaagaaggtccatccaatctctagtcttaccccatac
caaaacagatggactatcaaggtacgtgtgaccaacaagtccaaaatccgcacttggagc
aatgcccgtggtgaggggaagctcttctccatggatctctcagatcagtcgggcgaaatc
cgctgcactgccttcaaagatacggtggataaatattacgacatgatagagattggaaag
atttactttgtatctcgaggcactctgaagccggctaatcgacaatacacatccatcaac
aatgactatgagcttacattcaacaatgatacgatggtagagccttgcgtcgaggaagac
gtgtccattccagctgttcagtttgacttcaagagtattgcccatcttgaggacacggct
gaagattcaatgatagacgtgattggtgtgtgtaagagtacaagtgacctggcttcagtg
accatcaagtcatctaatcgagaggtcaataagaggtcaattcagctggttgatgattct
cagaaagaagtttctcttactctttggggcaaagaggctgaggagtttgatgggtccgga
aaccctgtcattgcagtaaagggagctcgtctgtctgggtttggaggaagatcgttgtct
gtcctacaatcaagtatcttccaggtcaacccagacatccccaaagcacatcacctcaaa
ggatggtttgacagcgagggtcattcccaggattcccagtctatctcaagtaagatggga
ggaggcggaggatcaaacaccaactggttgaacttccatgatgttcatgctcagaaccta
ggccagggtgaaaagccggattatttcacagtaaaaggaacgatactctttgtccggaag
gagaactgtatgtacatggcctgtccttcagccgagtgtaacaagaaggtatcagagaat
ggagatggatcatatcggtgtgagaagtgtgccaaagactttgagggtttcaaatacaga
cttctcctctctgctaatgttgctgatgctacagacaaccaatggattacatgctttcaa
gagacagcagaacagcttcttaataaacaagcccaggaactaggaagccttaaagatcag
ggtgaagcaactgaaagggaatttaatcaggtcttccaggatgcttgtttcaatgattac
atgtttaaaatgaggatcaagatggaaacatacaatgaggaggctcgtctgaaatgcacc
tgtgtgaacgctcaacccatcaatgtcagagattacaccaagaaactgatcaacgacatc
agactcatggcctctgcttag
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