Lytechinus pictus (painted urchin): 129254841
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Entry
129254841 CDS
T09066
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129254841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129254841
Enzymes [BR:
lpic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
129254841
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Other 90S particles
129254841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Capsid_VP7
Motif
Other DBs
NCBI-GeneID:
129254841
NCBI-ProteinID:
XP_054749353
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All DBs
Position
2:75564288..75567386
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AA seq
186 aa
AA seq
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MNCDHHKHLMKKHKREPSDCRPDITHQCLLMLFDSPLNRAGLLQVFIHTQRNVLIQISPQ
TRIPRTFDRFCGLMVQLLHKLSIHAADGPQKLLKVIKNPITDHLPVGCRKICTSFSAEKC
VHPRELAESDEPVVLVIGAMAHGKVEPDYTEGDVAISQYPLSAALTCAKICSGFEEAWDI
ESLAGT
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgatcatcacaaacatttgatgaagaagcataaaagagagccctcagactgc
agaccagacattacacatcagtgtttgctgatgctgtttgatagtcctctcaatcgagcg
ggtcttcttcaggttttcatccacacacagcgcaatgttctgattcagatcagccctcag
actaggatcccaagaacatttgacagattctgtggtttgatggtccagctcctccacaag
ctgagcatccatgctgcagacggtcctcaaaaactcctgaaggtcatcaagaatcctatc
acggaccacttaccagtaggctgccgcaagatatgtacttctttcagtgcagagaagtgt
gttcacccaagagagctggcagagtcagatgagcctgttgtcttagtaattggtgcaatg
gctcatgggaaggtggaaccagactacacagaaggagatgtagctatcagtcagtaccct
ttgtctgctgccctcacatgtgccaagatctgctcaggtttcgaagaagcatgggatatt
gaaagtcttgcaggaacgtag
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