Lytechinus pictus (painted urchin): 129255677
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Entry
129255677 CDS
T09066
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic00450
Selenocompound metabolism
lpic00970
Aminoacyl-tRNA biosynthesis
lpic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
129255677
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129255677
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpic01007
]
129255677
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129255677
Enzymes [BR:
lpic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
129255677
Amino acid related enzymes [BR:
lpic01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129255677
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129255677
Prokaryotic type
Other AARSs
129255677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C
GST_N_5
GST_C_3
Arc1p_N_like
GST_C_2
GST_C_6
Motif
Other DBs
NCBI-GeneID:
129255677
NCBI-ProteinID:
XP_054749987
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All DBs
Position
3:complement(53112396..53135385)
Genome browser
AA seq
923 aa
AA seq
DB search
MENDITMNMMSLNCHNLPHLPLYINLIGLLRTDCKVSYLRRSRLPALEISPTEFIFSANN
ICRYILTNSSEQSWELKVEEWVEWESTHLQTILAPYLNAVFGGGKKNTESLKLPFSRLND
ALVNKQYLVGTKLTAADIIIWCALYPAIADNPSLCADYKHLESWFQGLASQDSFQNGVAT
VTSGKGACAFKDSILSQHVKIPMSDAGHGQQAASSPASEGQDESKKDIPPEEIAAAKAAF
TRGRKSLPKVTKRVHPILPQPSGKNILITSALPYVNNVPHLGTIIGCVLSGDVFSRFCRL
RNYNTLYICGTDEYGTATETKALEEGMTPQQICDKYHALHRDIYKWFNIDFDFFGRTTTE
KQTEIAQDIFFRLHANNHILEDTVEQLLCQKCNRFLADRFVEGICPLCTYEDARGDQCDK
CGKLINATDLKKPRCKVCSATPVIKSSKHLFVDLPKLEPALKAFLQKSTSEGNWSSNAKL
ITNSWIRDGLKPRCITRDLKWGTPVPLEGYTDKVFYVWFDAPIGYPSITANYTDQWEKWW
KNPQQVKLYNFMAKDNVPFHSVIFPSCLIGADDNYTKVNHLIATEYLNYEDTKFSKSRGI
GVFGDNAQSTGIPADIWRFYLLFIRPESQDSAFSWADFVWKNNSELLNNLGNFINRGLTF
LEKSFDSAIPEIRLENEDERLIAEINRELKSYIALQEKVKIRDALKHILNISRLGNQHIQ
ANKPWVLVKGNPQEKVRAGTVIGLAANISCLLSVMLQPFMPETSATIKAQLQAPDECYVL
GEDFVCYLDKGHRIGKPSPLFSKIEPAQAEEFKKRFAGKQEKVGSASKPSGGSSAPAPAP
AAPSPSNQAAPAGPQEVERLTAEVTAQGEKVRKMKGEKADKTVVDAEVKLLLDLKRKLAI
ASGQDPDATTKSKGKNKNKSGKK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgatattacaatgaacatgatgtctctgaattgtcacaacttaccccacctt
cccctatatattaaccttattggtttactacgtacagactgcaaggtgtcatacctaaga
agaagcagacttccagctcttgagatatcaccaactgagttcatcttttctgcaaacaac
atttgcaggtatatcctgaccaacagttcagagcaatcttgggagttgaaagttgaagaa
tgggttgaatgggagagcacccatttacagactatacttgcaccttacctgaatgcggtc
tttggaggaggaaaaaagaatacagaatctctgaagcttccattctcaagactgaatgat
gcacttgtcaataaacaatacctagtaggaacaaaactgacagcagctgatatcataata
tggtgtgccctgtacccagccattgctgataacccaagtctgtgtgctgattacaagcat
cttgaatcctggttccagggccttgcatcacaagatagctttcagaatggtgttgctaca
gtgacatcagggaagggggcatgtgccttcaaggactccatcttgtctcaacatgttaag
attccaatgtctgatgcaggtcatggacaacaggcagctagtagtccggcctcagaaggg
caggatgagagcaaaaaggacattccacctgaagaaatagcagcagctaaggcagctttc
accagaggaagaaagtcattacctaaagtgaccaagagagttcatccaatactacctcaa
ccgtctgggaagaacatcctcattaccagtgctcttccatatgtgaacaatgtacctcat
ctaggaactattattggatgtgttcttagtggggatgtcttctccagattctgtcgtcta
aggaactacaataccctttacatctgtggcacagatgagtatggaacagctactgaaacc
aaggcattagaagaaggtatgacaccacaacagatatgtgacaaataccatgcacttcat
agagacatctacaagtggtttaatatcgactttgacttctttggtagaaccacaacagag
aagcaaacagagattgctcaagatatcttcttccgtcttcatgccaacaatcatattcta
gaggatacagtagaacagctcctgtgtcagaagtgcaatcgcttccttgctgatcgcttt
gtagaaggaatctgtccactctgtacgtatgaagatgccaggggtgaccagtgtgataaa
tgtggaaagctcatcaacgcaacagacctcaaaaaacctagatgtaaagtgtgcagtgct
actcctgttattaagagttcaaagcatctgtttgtagacctacccaaactagaacccgcc
ctcaaggcgttcttacagaagtctacatctgaaggaaactggtcttctaatgctaagctc
attacaaactcatggattagggatggactaaaaccaagatgtattacccgtgatttgaag
tggggtacacctgttccattggaaggatacacagataaggtgttttatgtatggtttgat
gctccaattggctatccgtccatcacagcaaattacactgatcaatgggaaaaatggtgg
aaaaacccacaacaggttaaactatacaacttcatggccaaagacaatgtgccattccat
agtgtgatatttcctagctgtttgataggtgctgatgataactacaccaaggtcaatcat
ttaatagcaacagaatacctaaactatgaagacaccaagttttccaagagccgtggtatc
ggtgtgttcggtgacaatgcccagtcaacaggtatcccagcagacatctggcggttctat
ctccttttcattagaccagagtctcaagatagtgccttcagctgggcagactttgtctgg
aagaacaacagtgagcttcttaacaaccttggtaacttcatcaacagaggattaacattc
ctagagaagagttttgacagtgcaattcctgagataagattagagaatgaagatgagaga
ttgattgcagagatcaaccgagagctaaagagttacattgcattgcaagagaaagtcaaa
atccgtgatgccttgaagcacatcctcaatatatctcgtcttggtaatcaacatattcaa
gcgaacaagccatgggttctagttaaaggaaatcctcaagaaaaagtccgtgctggtact
gtgataggtctggcagctaacatatcctgcctcctctcagtcatgctacaaccgttcatg
ccagagacaagtgccaccatcaaagcccagctccaggctccggatgaatgctatgtcttg
ggtgaggactttgtttgttacctggacaagggacataggataggaaagccaagtccactt
ttctctaagattgaaccagctcaggctgaagaattcaaaaagagatttgctgggaaacaa
gaaaaagttggaagtgcatctaagcccagtggaggatcaagtgccccagccccggccccg
gcagcaccctctcctagcaaccaagctgctccagctggaccccaggaggtggagagactt
actgcagaggttacagctcagggagaaaaagttcgaaaaatgaaaggcgagaaggctgat
aagacagtggtggatgcagaggtcaagcttttacttgatttaaaacgaaaattagcaatt
gcttctggtcaagatcctgatgctactactaagtcaaagggaaaaaataaaaataaaagt
ggaaaaaagtag
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