Lytechinus pictus (painted urchin): 129256012
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Entry
129256012 CDS
T09066
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129256012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpic02000
]
129256012
Transporters [BR:
lpic02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129256012
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129256012
NCBI-ProteinID:
XP_054750298
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Position
3:87455736..87492423
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AA seq
638 aa
AA seq
DB search
MASADAKALEMAEKGKKLDEKQEGEEEVVERVGWGNKMDFIMACIGYAVGLGNVWRFPYL
VYKNGGGAFLIPYFISLVLCGVPIFFMEVSLGQQLQTGGISVWEIYPILKGVGFAGATIS
AILNTYYIVIVAWSLLYFFYSFRSKLVWGDCDNYWNDFYCNDPALQTNCSAPTGYFCAAN
GTFLNKTLGESPAQQFWENRVLGISDGIDHIGGLRWDLVGCLALGWILTYLCIWKGVKQT
GKIVYFTALIPYVILLALLIRGLTLPGSSDGIYYYINPDWERLKTPTVWIDAATQIFFSY
GVGIGSLISLGSYNPIRNNSVIDTVIVGIVNAGTSLFAGFVIFSILGYMAYEQGVDVSEV
VDEGPGLTFVAYPTAVYYMPGAPAWAVIFFAMLIMLGLDSQFCVVEGLATSLMDEFPNYG
LRKNRSVFLAIFCLVDFALGLLCVTEGGMYFFQLMDSYGASGICLLWVAFWECASVSYGY
GLKNFYNRISTSIGFTPGWYWPLSWAALTPAISMGIFLFSLIDYQPAKYGEDYYYPVWGE
IIGWMMAIVSMQWVPIYAIYIMLTTPGSFRERCRIATTPRIVLPEPEDDNQTVSVEGNGS
DGSESIKNNATAPPNYDSATALNGEKKVDYENEGFTPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcagacgccaaggccttggaaatggcagagaaagggaagaagctcgacgaa
aagcaggagggggaggaggaggtggtggagagagttggatggggaaataaaatggacttt
attatggcttgtatcggctatgccgttggacttggcaacgtgtggagattcccatacctg
gtgtataaaaacggcggaggtgcctttctcataccctacttcatctctctggtgttatgt
ggtgttcctatattctttatggaagtatctctcggtcagcagctgcagactggtggtatc
agtgtgtgggaaatatatcctattttaaaaggtgttggttttgctggagctaccatctcg
gccatcttaaatacgtactacatcgtcatcgtcgcctggtccctcctctacttcttctac
tccttccgttcaaaactggtgtggggcgactgcgacaactactggaacgatttttactgt
aacgaccccgctcttcagacgaattgttcggcacccactggctatttctgcgccgccaac
ggcacgttcctcaataagacgttaggagaatcaccagctcaacaattttgggaaaaccga
gttttaggcatcagtgatggtatcgaccatatcggaggtctcagatgggatcttgtggga
tgtttggcgctcggatggattttaacatatctttgcatttggaaaggtgttaaacagacg
ggaaagattgtttacttcacagctttgatcccttacgtcattttgttggctcttttgatc
cgaggtctaacgttacccggatcttctgacggtatttattactacattaatcctgattgg
gagcgtctcaaaacaccaacagtttggatcgatgcggcaacacaaattttcttttcatat
ggcgttggaataggatcacttatatctcttggaagttacaacccgattaggaataattct
gttattgatactgtaattgtaggaatagtgaatgctggaacaagtttatttgctggtttt
gttatcttctccattcttggatacatggcttacgagcaaggggttgatgtatcagaggtt
gtcgatgaagggcctggtttaacgtttgtggcctacccgaccgctgtgtattacatgccc
ggtgccccggcctgggccgtcattttcttcgccatgctgatcatgttgggtctagacagt
cagttctgtgtagtggaaggacttgccacttctcttatggatgagttcccaaactacggt
cttcgcaagaaccgctccgtgtttttagccatcttctgtctcgtcgatttcgctcttggt
ctcctttgcgtaacagagggagggatgtacttcttccagttgatggacagctatggtgcg
agcggtatatgcttattatgggtcgccttctgggaatgtgcgtcagtgtcatacggctac
ggcctcaagaacttctacaacaggataagcacgagtattggtttcacccccggatggtat
tggcctctgtcttgggctgctctcaccccggcaatcagcatgggtatcttcttattcagt
cttatcgactatcaaccagctaagtatggtgaggactactactatcccgtctggggtgag
attatcggttggatgatggctattgtctctatgcagtgggttccaatctatgccatttat
atcatgcttacgacacctggttcattcagagagcgatgtcgaatcgccacgacaccccgc
atcgttctccccgaaccggaagacgacaaccagactgtatcagtggaagggaacggcagc
gacgggtccgagtcaatcaagaacaacgcaacagcgccaccaaactacgactccgcaacg
gcgttaaacggtgaaaagaaagttgattacgaaaacgaaggattcactccgttataa
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