Lytechinus pictus (painted urchin): 129256266
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Entry
129256266 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic00100
Steroid biosynthesis
lpic01100
Metabolic pathways
Module
lpic_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129256266
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lpic01006
]
129256266
Enzymes [BR:
lpic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129256266
Prenyltransferases [BR:
lpic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129256266
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
129256266
NCBI-ProteinID:
XP_054750492
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Position
1:5945820..5956449
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AA seq
410 aa
AA seq
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MEFLKSIGHPDEVMALLKFKLGGGQHIIPKQKLDEMSTTAKKCYMYLNQTSRSFAAVIQA
LEGDLRHAVCIFYLVLRALDTVEDDMTIPLKDKVQMLQNFYKNLEDPDWKYMESKDKDRI
VLEDFPAISMEYRDLDEHYREVISDICHKMGDGMSKVLQTEVITLQDWNMYCHYVAGLVG
IGLSRLFSASKLEDPIVGKDTHLSNSMGLFLQKTNIIRDYLEDNIDKREFWPRDVWSKYG
EKTEXLQDKENIESAVHCLNELITNALEHVPDVIKYMSRIKNQSIFNFCAIPQVMAIATL
AKCYNNRKVFSGVVKIRKGQAVSLMMEATCFQSLRRILYKYAQEVGKAIPPGDPSALKTQ
KIVSTITSLGEDTITGYNLFPPLYVSVAIMLALIIYNYWSTLILLADELI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttgaagtcgataggtcacccagacgaggtcatggctctcctcaagtttaag
ctgggaggaggtcagcacatcattccaaaacaaaaactggatgagatgtcaacaactgct
aagaaatgttacatgtatctgaatcagacaagtaggagctttgctgcagtcattcaggca
ttggaaggagatctcagacatgcagtatgtatattctacctagttctgagggcattggat
actgttgaagatgacatgaccattcccttgaaagataaagtccaaatgctacagaatttc
tacaaaaatcttgaggatcctgattggaagtatatggaaagcaaagacaaggatagaatc
gtgcttgaagattttccagcaatttcaatggaatacagggatttggatgagcattacagg
gaagtgatctcggatatctgccataaaatgggagatggaatgagtaaggtcttacaaaca
gaagtcatcacattacaggattggaatatgtattgtcattatgtagctggactggtggga
ataggactctcaagactcttcagtgcatctaagctggaagaccctatcgttggcaaagat
acacatctatcaaactccatgggactgttcttacagaaaactaatatcattcgtgactac
ctcgaggataacattgataagagggaattctggccaagagatgtatggagcaaatatggg
gaaaaaactgagtgacttcaagacaaggaaaatatagaatcagcagtgcattgcctgaat
gaacttatcacaaacgcccttgaacatgttcctgatgtcatcaaatacatgtcacgcatc
aaaaaccaatctatcttcaacttttgtgcaattcctcaggtgatggccatagctacactt
gctaagtgttataacaaccgtaaagtattctctggagtggtcaagattcgcaagggtcaa
gcagtcagcctcatgatggaggctacatgctttcagagtttgagaaggattctatataaa
tatgctcaggaggttggtaaagccattccacctggtgatccatcagctttgaagacacag
aagattgtcagcactattacctcacttggagaagataccatcacagggtataatctcttc
ccacctctctatgtctcagtggctatcatgcttgcccttatcatatataactactggagt
acattaattctacttgccgatgagttaatctga
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