Lytechinus pictus (painted urchin): 129256389
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Entry
129256389 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
lpic04137
Mitophagy - animal
lpic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129256389
04120 Ubiquitin mediated proteolysis
129256389
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129256389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129256389
04121 Ubiquitin system [BR:
lpic04121
]
129256389
03029 Mitochondrial biogenesis [BR:
lpic03029
]
129256389
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129256389
Membrane trafficking [BR:
lpic04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129256389
Aggrephagy
Other aggrephagy associated proteins
129256389
Xenophagy
Other xenophagy associated proteins
129256389
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129256389
Mitochondrial biogenesis [BR:
lpic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129256389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
129256389
NCBI-ProteinID:
XP_054750583
LinkDB
All DBs
Position
3:59159040..59169528
Genome browser
AA seq
330 aa
AA seq
DB search
MNHGYKLCFVTFYVIYKISTCHSKMDQILISVRLIQSPRLGKFSGNVAEMRMPVHATQSG
AEIRDEVARLSGQSPADIRLIFAGKLITDVQTMEDLRICENTVIHAVPSQRIQHTETIHD
IDVEQPPVHGLLESRIVDKGLRNGNIPNPDPGSSLRPGFYIYCKSHCVSIQPGKLRVCCQ
TCKDPAFIVREDPVCWDDVILSDRISGSCLTLGCQGDKAEFFFKCSSHLSSGNDQLTVLP
LIRTNTRRVICITCADVLISVLVFPCSAAHVMCLDCFSQYCRLCLNERRFIQSPELGYTL
PCPAGCEDSLIKDTHHFLVLGKEQVQVTLI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatggttataaattatgttttgtcactttttatgtgatttacaagatttcaacg
tgtcattcaaagatggaccagatccttatatcagtcaggctcattcagtctccaaggttg
ggtaaattttccggaaatgtagcagaaatgaggatgcctgttcacgcgacgcaaagtggg
gccgagatacgagacgaggttgctcgcctctcgggacagtcccccgcagatattcgcctg
atattcgctgggaagttgatcactgatgtgcaaacaatggaggatcttaggatttgtgag
aacactgtgatccatgctgtaccttctcagaggattcaacataccgagaccattcatgac
attgacgtggaacaaccaccggtgcatggtctcttagaatcaagaattgtggacaaaggc
cttagaaatggcaatatacctaatcctgaccctgggtcatctcttcgacctggcttctat
atttattgcaagagtcactgtgtctcaatacaacctggcaagctgagggtgtgctgtcaa
acctgtaaggatcctgctttcattgtcagagaggatcctgtatgctgggatgatgtaatt
ctgtccgataggatatcaggaagttgccttactctaggatgccaaggtgataaagctgaa
tttttcttcaagtgttcatcacatttatcatcagggaatgatcaactcacagtgcttcct
ctcatacggaccaacaccagaagggttatatgcatcacatgtgcagatgtcttaatatct
gtattggtctttccatgttcagctgctcatgtgatgtgtttggattgttttagccaatac
tgtaggttgtgtttaaatgagaggagatttattcagagtcctgagctaggatacacatta
ccatgcccagctggatgtgaggattctctcatcaaggacacacatcatttcttggtgctg
ggaaaggaacaggtacaggttacattgatttga
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integrated database retrieval system
