Lytechinus pictus (painted urchin): 129256805
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Entry
129256805 CDS
T09066
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase-like isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129256805
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
129256805
2.7.7.52 RNA uridylyltransferase
129256805
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
129256805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
RRM_1
TUTase
RL
RRM_PARP14_3
PAP_assoc
zf-met
RRM_3
Nup35_RRM_2
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
129256805
NCBI-ProteinID:
XP_054750966
LinkDB
All DBs
Position
3:19520502..19535846
Genome browser
AA seq
831 aa
AA seq
DB search
MEHDTISSKGKSFHCDICIVKIMSGKAVEDHLQGKKHQRLIAIQASRQKQAECSIFVGGL
TKLVSELELTDYFSKFGPVAQVIVDKDKGKYAIVEFSQRDDAERASEEEKQKMNGKKITV
RPREHKPLTLKGKQQTSAGKKAKTARDKEMENILEGLLEAEDVSSQMIALVEETCLDQPD
LQLRYLICDLLQEVFVEMFPKCRVFPYGSSVSRFGVKGCDLDLQIDLGQDDQQYKYKFAS
MFPNDDVMDTNEEMDAGPSNSDVQSSEEPDTSKMTHEDILQVLCRLLKQCVPSCQHVRVI
PSSRRPVIKFIHKESSLHCDLSLDNRLALRNTELLHFYSLLDDRIRPLICCLRQWSKHHQ
LSGNPQGPGPRLTNYALTLLVIHYLQNTQPPLLPTIHQLKELAGPDKSVILGGWDCSFTT
DPSKFSCRDNTESLESLMKGFFCFYTKCDFATSVLCPVSGTIIPLTQFKTQMTPDSSSSK
EFKVGPFNIQDPLELTHNVAMNVNDKIAVKMREELRKASLTCISLRYRKQGEDPETGKIP
RWGLLSLLEERDGGRKKAEGGASVVIPLKMSQVTPEFIKQFEDARDMKWAWCQHAEKFAM
GLIEDVLGILCSEESQDDHTTEMEDGVHSLQPPQEMIEHPESSCSNSDCHTSTTKDIQLR
DTVSDEDIEPSRKRQRISSNLDDDDDEHEMSMTSSSSMNSPAVITSPGSSTSPATNHDGS
TISKVIQCKAMHNVWVGRRKLRRKLQTEKPWGDAPIDELSKEKLVTHEIMKSSTTPSTPL
TEFKIEFRRKLAADCTLVIIAFHTSNNDVNAKNFAHFYDEFVARMLCHLKV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgatacgatatcatcaaaagggaaatctttccattgtgacatctgcattgtg
aaaatcatgtcaggtaaagctgttgaggatcatcttcaaggaaagaaacatcaacgtctg
attgcaatccaggcttcaagacaaaagcaagcagaatgtagtatatttgttgggggactt
accaagctcgtctctgaattagagctcacagattacttctccaaatttggccctgttgct
caggtcattgtagacaaggataagggaaagtatgccattgtagagttcagtcagagagat
gatgcagagagggcatcagaagaagagaaacagaagatgaatggaaagaagatcacagtt
agacctagagaacataaacctttaactctcaaaggcaagcaacaaacttctgcagggaag
aaagccaagactgccagagataaagagatggaaaatatcttggaaggactcctggaagca
gaagatgtttcttctcaaatgatagctcttgtagaggaaacctgccttgatcaacctgac
cttcagcttaggtatctcatctgtgatttacttcaagaagtctttgtggaaatgttccct
aagtgtagagtcttcccttatggctcttctgtcagcaggtttggggttaaaggttgtgac
cttgaccttcagattgaccttggtcaagatgaccagcagtataagtacaaatttgcttca
atgttccctaatgatgatgtcatggacaccaatgaagaaatggatgctggtccatcaaac
tctgatgtccagtctagtgaagagccagatacaagtaaaatgacacatgaagatattctt
caagtcctatgtcgtttgttgaagcaatgtgtgccatcctgccagcatgttagggtaatt
cctagtagtcgtagacccgtcatcaagtttattcacaaggagtctagcttgcattgtgac
ttgtctttagataacaggttggctctaagaaacactgagctccttcacttctactctctg
ctagatgaccgtataagaccgctcatatgttgccttcgtcagtggtcaaaacatcatcag
ctgtcagggaatccacagggtccaggtcctagattgactaactatgctttgacactttta
gtaattcactaccttcagaacacacaaccaccattgctaccaactattcatcaactcaaa
gaacttgcaggtccagataagagtgtgatccttggaggatgggactgttctttcacaaca
gatccatcaaaattcagttgccgtgacaacacagaatctctagaatcactgatgaagggt
tttttctgcttctacaccaagtgtgacttcgctactagtgtactttgtcctgtatcaggc
accatcatccctctcacccagtttaagactcagatgactccagattcatcatcctctaaa
gagttcaaagtggggccattcaacattcaagatccattagagctaacacacaatgttgcc
atgaatgtcaatgacaaaattgcagttaagatgcgagaggagctgcgcaaggccagcttg
acctgtatctcattgaggtacaggaagcaaggggaggatccagaaacaggtaagatacca
cgatgggggctcctaagcctcctggaagagagagatggaggaaggaagaaagcagaaggt
ggagcatcagttgtcatccccttgaaaatgagccaagtgactcctgagtttattaagcaa
tttgaggatgcaagagatatgaaatgggcctggtgtcaacatgcagagaaatttgctatg
ggcctgatcgaagatgtgcttgggattttatgttctgaagaatctcaggatgatcatacc
actgaaatggaagatggtgttcactcactacaaccgccacaagaaatgatagagcatcct
gaatcttcttgctcaaacagtgattgccacactagcacaacaaaagacattcagttgagg
gatacagtaagtgatgaagatattgaaccttcacggaagagacaaaggatttcttccaat
ttagatgatgatgatgatgagcatgaaatgtctatgacctccagtagtagcatgaactct
ccagctgtaatcacatccccaggatcctctacatctcctgctaccaaccatgatggcagc
acaatcagcaaggtcattcagtgtaaagccatgcataatgtctgggtaggccgtaggaaa
ttacgacgtaaactccaaacagagaaaccatggggagatgcaccaattgatgagctcagc
aaagaaaagcttgttactcatgagataatgaagtcctctacaactccttctacccccctt
acagagtttaagattgaattcagaagaaagctagcagccgattgcacacttgtcattata
gcatttcatacttcaaacaatgatgtaaatgcaaagaactttgcacatttttatgatgaa
tttgttgctagaatgctgtgccacttgaaagtatga
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