Lytechinus pictus (painted urchin): 129256861
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Entry
129256861 CDS
T09066
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129256861
09123 Folding, sorting and degradation
03018 RNA degradation
129256861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129256861
03041 Spliceosome [BR:
lpic03041
]
129256861
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129256861
mRNA degradation factors
5'-3' decay
Lsm complex
129256861
Spliceosome [BR:
lpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129256861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
TraI-like_C
Motif
Other DBs
NCBI-GeneID:
129256861
NCBI-ProteinID:
XP_054751035
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All DBs
Position
3:complement(23984208..23995029)
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AA seq
104 aa
AA seq
DB search
MAQQEQQKKKKESILDLSKYIDKQIRVKFQGGREVTGILKGFDPLLNLVLDGTTEFMRDP
DDPFKLTDDTRNLGIAVCRGTSVVLICPADGMEPIANPFVQQDG
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaggagcaacagaagaagaagaaggagagtattttagatttgtcaaaatat
attgacaaacaaatacgtgtcaaattccaaggaggcagagaagtgacagggattctgaaa
ggatttgatccactcctcaatttggtactagatggaacaacagagttcatgagagatcca
gatgacccatttaaactgactgatgatacaaggaatcttggtattgctgtgtgccgaggg
acgtcagtagtccttatatgcccagcagatggcatggaacctatagccaatccttttgta
caacaagatgggtga
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