Lytechinus pictus (painted urchin): 129256877
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Entry
129256877 CDS
T09066
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129256877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129256877
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129256877
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Ortholog
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GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
129256877
NCBI-ProteinID:
XP_054751054
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All DBs
Position
3:24956285..24963964
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AA seq
334 aa
AA seq
DB search
MSDNILEWRRGRTPDFSVAPWLPFTIEGNRLLVKSLFTKTSFTVLVYDYTTIWIEQGNKE
VVLNTAKVCNPSVEAPLSELLQHLSDLLQEVKQSVKYSLQYKEKDRRKEHLKIHLTSKLP
QGVPFKWTLSLSKANDEMAASHLTNPLLILVSELMRREKELHRLIKKKDDEIEDYKMAGA
KVSRKNKLTPVFEGKSFNQDMIGSKAFRTEIENNGERAFIDQGQDLYKEVMITRAWLKRP
LDAEEVSDDEIPDDDADPHDAAPAWVSRLPGSLVGDVSSDTLSPVKSSPSKSPVKPSPGE
SAQDNELRRREALEKRLAEEKAKLQTKKKKKKLF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataatattttagaatggcgtcgcggaaggacccctgatttctctgtagctcca
tggctaccatttaccattgagggaaatcgccttcttgttaaaagcctgtttaccaagaca
tcattcactgttctggtgtatgactatacaaccatttggatagaacaaggcaataaagag
gttgtcctcaacactgcaaaggtatgtaatccaagtgtagaggctcctctcagtgaacta
ttgcagcatctaagtgatctccttcaagaagttaaacaatctgtaaagtattccttgcag
tacaaggaaaaggacagaagaaaagaacatttgaagattcatttgacatctaagttacct
caaggagtgcctttcaaatggacactttctctctcaaaagctaatgatgaaatggctgct
tcacatctcaccaatccacttctcatcttggtttcagagctgatgagaagagagaaagag
ttacacagactcataaagaaaaaagatgatgagattgaagactacaaaatggcaggagca
aaggtctcaagaaagaacaaactgactccggtatttgaagggaaatcatttaaccaggat
atgatcggatcaaaggcatttagaacagagattgaaaacaatggtgagagagctttcatt
gatcaagggcaagacctctacaaagaagtaatgatcactagagcatggttgaaacgacct
ttagatgcagaggaagttagtgacgatgaaatacctgatgatgatgctgaccctcatgat
gctgctcctgcatgggtttcacgtctaccaggttcattggttggtgatgtgtcttctgat
accttgtcacctgttaaatcatctccttctaaatctcctgtaaaaccatctccaggagaa
tctgcacaggacaatgaactaagaagaagagaggcattggaaaagagactggcagaagaa
aaagcaaagttgcagacaaagaaaaagaaaaagaagcttttttaa
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