Lytechinus pictus (painted urchin): 129257762
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Entry
129257762 CDS
T09066
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129257762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129257762
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129257762
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
129257762
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129257762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
129257762
NCBI-ProteinID:
XP_054752134
LinkDB
All DBs
Position
3:complement(75851468..75882898)
Genome browser
AA seq
1547 aa
AA seq
DB search
RIKRKIALLPYIQSVQSARLPTEKITSKDVLQLKSKDKHLYVCGQFLGEAFDHLVNIKCR
IVGPQCVISCLELQKAVPNVPHPINNIAMQDVVVSCSSIERAQRARIHQLLEWMGGKVSK
DLTEIVTHLVVGEVGSKKYHVAANLKKQIMLPEWIEVAWEESQTKHFSAKSEEFHSRYRC
PAFKGCIICVTGVEASQRQDVRQRVPECGGYYTGELKYNECTHLIVGAARGPKFEFARKW
KIHTVSINWFYDSVEAGYCLDEQLYNVLSQEQPTSTPVKANQEHPRLSTLGNISAINVSS
IHPIDETAVSDANITMETSRLVPPLQPQVGLAELEKLDLATCEAEMFLDGCKIFLSGFSG
QHLEKLRKVVNAGGGTRFNQINENVSHVIIGKRIEDHVTELKELTNRPSTVSVHWLLECA
KQGRQVSEQDFILKDILDVHEAADKENEITFKLPTNQVKRVSKVGSRKRSDEHGEEEDIL
SQYLPNASSAGGGDNDSTMIQEENADRTHSDGNRTQEDDDETQIDENEEGEDGEKDGIFA
GKKFVVLGFLPEQERNLCEMIPSQAGIVLPFNTRSIPDYAVVPIIGTLVNMTVGEIVTNC
WLQMSLEAETLLEPSSNDLFTPIPIMKEAMPLRNCVISISQYSFVERDCLLHIAELLGAQ
CQEYFVRKAINNLEANTHLLLRDPEGTKYVASKKWKVPAITRRWLLDCARTGKKQPEKNY
LVDLTKEEPSDMSTKEEPLPPKKPLSPPKETPKAKETSPEQTKTIPKSENQQEKPLEDHP
QKTPKSVTIKERSPVQDTGASTRNQIPKATIPAGRPVRNKTLEMVKQPIANKSVEQVKGQ
TPGKESTPSRILRPGFKPSFDLDDAVAALDSPGMPVGKGHRRKSSLPLEEFFHQNITNAL
QMGSTKAGRSEDEDDDTVFKEEEPAPGILHGVVICVSKKLSRKQGEYNDIAMALGAEYHW
TYDEKCTHFIFQGKANDTAKEFRLAKSQGKIIVSSHWLLACQEENKRLDESCYPHTYNPK
LSLSVVASQGRTPARSVRSKVTPVAVATPLAPKPPPPKPPPAVEKKEDIEADTMSDDELL
RAVENEEQSKTAGDHGTSINLQKQLEDVMTSTLNLRGSRRRSRRPGSSASISLAGDTTSA
DDSSNGRRSTRSRVKRGPEKKEEGASKDSGQHVEASQSVQITWDDPTSRKEKAKIMAQIK
RADNGLDEPEEQDGEDAQQMEEQMVEDHAETKTDVARHGTSGSHKHEDSPPSPTPKAPPI
RLPPARPAVAPQPMDDTQDDPQQEVLTKQPALPPKFLFTGMGAHEKIDYSALIEELGGEV
KDAQYFDASCSHIIVGNPTRNEKYLAALATGKWVLHKSYFEACRAEKGFVEEEPHEWGNR
TDLSKLSETGKKMARAATRWRCRIQEQEKMGSSIGAFDGWKVVLMVEKSKEMCFKRLLEA
GGAKVLAVRPPFTNHLDASHAFFDLHKVKVTAEAVALDELVQSGIMCLKPEYIADYLVLD
PSPDPENYIISEAKPILQKLVEQAGPATKRRGSELATTPRSKRTRHR
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
agaattaaaagaaaaattgctcttctgccttatattcagtctgttcagagtgcccgtcta
ccaacagagaaaatcaccagtaaagatgtcttgcagctgaaaagcaaggacaaacacctc
tacgtctgtggtcagttcttgggtgaagcatttgatcacttggtcaatataaaatgcagg
atcgttggtccccagtgtgtgatatcttgtctagagcttcagaaagctgttcccaatgtc
cctcatccaatcaacaacatagccatgcaagatgtggtcgtcagctgctcaagcattgag
agggcacagagggctcgaatccatcagctgttagaatggatgggtggaaaggtctccaag
gaccttactgagatagtaactcacctggtcgtaggagaagttggctccaagaagtatcat
gttgctgctaatctgaagaagcaaataatgctgccagaatggatagaagtagcatgggag
gagagccaaaccaaacacttcagtgcgaaatccgaggaattccatagtagatacagatgt
cctgcattcaaaggctgtatcatctgtgtgacgggggttgaggcatcacagagacaagat
gtcaggcagcgtgtacctgaatgcggcggttactacactggagagctgaagtacaatgag
tgtacccatctcatcgtaggggctgcaagaggtccaaagttcgaatttgctaggaagtgg
aagattcatactgtttcaatcaattggttttatgacagtgtagaagctggttactgtctg
gatgaacaactctacaatgtactttcacaggaacaaccaacatcaaccccagtcaaggcc
aatcaagaacacccaaggcttagtacccttggaaatatcagtgcaataaatgttagcagt
atccatccgatagacgagacggctgtaagtgatgcaaacatcaccatggaaacgagtcga
cttgtaccgcctcttcaacctcaggttggcctcgcagagctagagaagcttgatcttgcc
acatgtgaagcagagatgtttcttgatggatgtaagattttcttaagcgggttctctggg
cagcatttagagaagcttcgtaaagttgtgaatgcaggaggtgggacacgctttaatcag
ataaatgagaatgtgtctcatgtcattattggtaaaaggatagaagatcacgtaactgag
ctgaaagaattaacaaacagaccatccacagtgtccgtccattggttgcttgagtgtgct
aagcaaggcagacaggtttctgaacaggactttatcttgaaggatatcttggatgtccat
gaggctgctgataaggagaatgaaatcactttcaaactcccaacgaatcaagtaaagaga
gtgtcaaaagttggatcaagaaagagatctgatgaacatggagaagaagaggatatattg
agccagtatttaccaaatgcttcatctgcaggtggtggtgacaacgactctacaatgatc
caggaagaaaatgcagacaggactcatagtgacgggaatagaacccaagaagatgatgac
gagactcagatagatgagaatgaagaaggagaagatggagagaaggatggaatctttgct
gggaagaagtttgtcgttcttggtttccttccagagcaagagcgtaatctgtgtgaaatg
atcccgagtcaagcaggaattgtcttacccttcaacacccgctccataccggactacgcg
gtggttcccatcatcggaaccctcgtcaacatgaccgtaggtgagatagtcaccaactgt
tggcttcagatgtctcttgaagcagagacactgttagaaccctccagcaacgatctcttt
actcctatccctatcatgaaagaagccatgcctctcaggaattgcgtcatatcaataagt
cagtacagcttcgtagaacgtgactgtctccttcacatcgccgagctgttgggagcacaa
tgccaggagtactttgtgaggaaagctataaacaaccttgaagcaaacactcatctactg
ctaagagacccagagggtaccaagtatgtggcttctaagaaatggaaggtccctgccata
accagacgatggcttctggactgcgccagaacaggtaaaaagcaaccagagaagaactac
cttgtggatctcacaaaagaagaaccaagtgacatgtctactaaggaggaaccattacca
ccaaagaaaccattatcacctcccaaggaaacaccaaaagccaaggaaacctcaccagaa
caaacaaaaaccattccaaagtcagagaatcaacaagaaaagcctcttgaggatcatcct
cagaagacaccaaagagtgtaacaatcaaggagagatctcctgtgcaggatacaggagca
agtactcggaaccagattcctaaagccacaatccctgctggacggcctgtcaggaacaaa
acactagagatggtgaaacaaccaatcgcaaacaagagcgttgaacaggtcaaaggtcag
actcctggtaaagagagcactccaagcaggatcttacgtccaggtttcaaaccctcattt
gatctggatgatgctgtagcagctttggattctcctggaatgccagtagggaagggtcat
cgaaggaagtcaagtctgccactggaggaattctttcatcagaacatcaccaatgcccta
cagatgggaagtactaaagcaggaaggtcagaagatgaagatgatgacactgttttcaaa
gaagaggagcctgcacctggtattcttcatggagttgtcatctgtgtgagtaagaaactg
agcagaaagcaaggagaatacaatgacattgccatggcattgggtgcagagtaccactgg
acctacgatgagaagtgcacccattttatcttccagggcaaagccaatgacacggccaag
gaattccgtctagccaagagccaagggaagatcatcgtttcctcgcactggctgctggct
tgtcaagaagagaataagagacttgatgaatcgtgctatccacacacctacaacccaaaa
cttagtctgtcagtggttgcttcccaaggtcgcacacctgctcgttcagtgaggtcaaag
gtcacacccgttgccgtggccacaccactagccccgaaaccgcctccacctaaacctcca
ccagccgttgagaagaaagaagacattgaagcagataccatgtccgatgatgaactgttg
agggcggtagagaacgaagagcaaagcaagacagcaggggatcatgggacttctattaat
cttcagaaacagctcgaggacgtcatgacatcgacactgaatctaaggggtagtcgaaga
cgtagccggcggcctggtagcagcgcttccatctcgttggctggagatacgaccagtgct
gatgacagtagcaatggaaggagaagtacaaggtctagggtgaagcgtggacctgagaaa
aaggaggaaggggctagcaaagattcaggtcaacatgttgaggcttctcagagtgttcag
atcacctgggatgatcctaccagccggaaggagaaagcaaagatcatggctcagatcaag
agagcagacaatggactcgatgaacctgaggaacaagatggggaggatgcccagcagatg
gaagagcaaatggttgaggatcatgcggaaaccaagaccgatgtagctcgacacgggaca
agtggttctcacaaacacgaggacagcccaccaagtcctacccctaaagctcctcctata
agactaccccctgcaaggcccgccgtggctccacaaccaatggacgatacgcaggatgat
ccacaacaagaggttctgacgaagcaacccgctttgcctcctaagtttctgttcactgga
atgggagctcatgagaagattgattatagtgccctcatcgaagagcttggcggggaagtc
aaagacgctcaatactttgatgcctcttgctctcatattattgtaggtaatccaaccagg
aatgagaagtatctggcggctctagctaccggtaaatgggttcttcataaatcctacttt
gaggcttgcagagcagagaagggctttgttgaggaggaacctcacgagtggggtaataga
accgatctgagtaaactgagcgagaccggtaagaagatggctcgtgctgctacaagatgg
aggtgtcggattcaggaacaagaaaagatgggctcaagcattggagcgtttgatggctgg
aaggtcgtgctgatggttgagaagagtaaagagatgtgtttcaaacgtcttctggaagct
ggtggcgctaaagtccttgctgtcagacctccatttaccaaccatcttgatgctagccat
gctttctttgaccttcataaggtcaaagtcacagccgaagcggttgcccttgatgagttg
gttcaatctggtatcatgtgtttgaagcctgaatatattgctgattatctggtcctagac
ccaagcccagatccagaaaattatataatcagtgaagccaagcctatcttacagaagctt
gtggagcaagcaggaccagctaccaaacgcagaggatcagagctcgctacaacgccaaga
agcaaacgaacaaggcatcgctag
DBGET
integrated database retrieval system
