Lytechinus pictus (painted urchin): 129258539
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Entry
129258539 CDS
T09066
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129258539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129258539
Membrane trafficking [BR:
lpic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129258539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
zf_RING_Vps8
TPR_VPS8_2
TPR_Vps41
Clathrin
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_5
zf-RING_11
PHD_NSD
zf-RING_UBOX
zf-RING_2
PHD
zf-BED
zf-rbx1
zf-C3H2C3
Prok-RING_1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129258539
NCBI-ProteinID:
XP_054752774
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Position
1:complement(19682776..19701995)
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AA seq
877 aa
AA seq
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MKQGPERGAIHLLEEHFQRVVPVCVEHCLMLGRKDVLFGSIYEKFRHDIIAKGVYLECLE
PYILNDRLTSVTPEVMKDFIEHYREKELISNVEACIVHMDIASLDIHQVVSLCWAYGLYD
AIIYVYNKGMNDYVTPLEELLQLLRAAVRASSQLSDNQIRLGNKLLVYISCCLAGRAYPM
GDIPTHLVQDVKQGVWKCLTALHTKDPSPDELTYPNLRTLLTFDTREFLNVLSLAFEEPE
FDAPQEANSMQSRQRIVDILLQVMVESVGFSPAQVGCLFTFLARQMAKHENTIYVNRMLF
EQVLEFLSNPSGETRHEEREQALLELLNAGDLLQVDHERLLQLAEGAKFYRVCEVLYERR
REFDKILLCYLRDSSRKATIFSYIHQVMMESYYTEAEKDAVQRQAIKHLQDLVAIDSRET
AQLVLKVFAHSLSDVVIQLQNQPELQYEFLEGVFDGRDTGSALYGRDEAQPDCYLHEKFL
DLMCTFNPKKVLNFVMMSENYRLEEALHIVRKHKMSEATAFLLEKSGDIQGAFGILMENL
QTKVKGLSDVVKGHDGSQNDGMDITLGLSNVQVVLMVLVQLCQRNSPKLDEEGRETLWFP
LLDLMMTTQRRLKPSFNETQFESFKELTRHVLNSMMGHLSLPRILQKIMQDPTYSTGRFG
EIRELIVGMLETYTYESTLLKTANRLLDRDLYGSVKNLTMAANRGLMPRRESCMICGKNY
SYSTESDNLLIFSCGHTYHSTCLQTAGCSAMIDGQRHWTCLQCYSARRGAALTPNRRPRL
FSSGEEPKRGGGPTSPRGGAAGDSKDTAEEDVSLNPEQEASLENLKKWTEGPSRLAILSE
VLLSQRANPSSKGLVRPNSILHQESFRLRLAPPPIDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggacctgagagaggagcgattcacctgctagaagaacactttcaaagagtt
gtaccagtttgtgtagaacattgcctgatgctcgggagaaaagacgttctgtttggatca
atctacgagaagttcagacatgacatcatcgccaagggggtgtacctagagtgcctggag
ccgtacatcctcaacgaccgtttgacctctgtgacccctgaggtcatgaaagatttcatc
gagcactatcgggagaaagagctgatatccaatgtcgaggcctgtatagtgcatatggac
attgcaagtttagatattcatcaagttgtatcactttgttgggcttatggtttgtacgac
gccatcatctacgtctacaacaaagggatgaatgattacgtaactcctctggaagagctt
ctacagctgcttagagctgctgtcagagccagcagtcaactgtcagacaaccaaataaga
ctaggaaacaagctgcttgtgtatatcagttgttgccttgcaggcagggcataccctatg
ggggatataccaacacacctagtccaagatgtcaagcagggggtttggaaatgtctgaca
gcacttcataccaaagacccgtccccagatgaactaacctaccctaaccttcgaacccta
ttgacctttgacaccagggagttcctcaatgtcctgtccctagcgtttgaggaaccagag
tttgatgcacctcaggaagctaattcaatgcaatctagacaaaggatagtagacattctt
ctacaagtaatggtagaaagcgttggcttctcgcctgctcaggtcggctgtctcttcaca
ttcctagctcgtcagatggccaaacatgaaaacactatctatgtcaatagaatgcttttt
gaacaggttttagaatttctatccaatccatctggagaaacaaggcatgaagagagggag
caggctctcctggagctcttgaatgcgggagacctgctccaggtggatcatgaaaggctt
ctccagctggcagaaggagccaaattctatcgtgtatgtgaagtcttgtatgaaagaaga
agggagtttgataagattcttctctgctatttaagagattcgtcaaggaaagcgaccata
ttctcgtacattcaccaagtgatgatggagagttactacacggaagcagagaaagatgca
gtccagcgacaggcaattaaacatcttcaggatcttgttgccatagacagcagagagact
gcccagttggtcctgaaagtctttgctcattcgttgagtgatgtagtcatacaacttcag
aaccaaccagaactgcagtatgaattccttgaaggtgtgtttgatggcagagatacaggt
agcgccctctatggacgagatgaggcacagcctgactgctatctacatgagaagttcctg
gatctgatgtgtacattcaatcctaagaaggtccttaactttgttatgatgtcagagaat
tacagacttgaggaagcacttcatattgtacgcaagcacaagatgtcagaagccactgcc
tttttgttggagaaatctggagacattcaaggagcctttgggattctcatggagaaccta
cagactaaggtgaaaggtctctcggatgtggtgaaaggtcatgatggaagtcagaatgat
ggaatggatatcaccttgggtctgtccaatgtgcaagtagttctgatggttcttgttcaa
ctttgccagaggaactcaccaaagttagatgaagaaggccgagagacattatggtttccc
ctcttggatctgatgatgacaacacagagaagactcaaaccatcctttaatgagacccag
tttgaaagtttcaaagagctgacaaggcatgttttgaatagcatgatgggacatctctca
ttacccagaatccttcagaaaatcatgcaggatcccacatacagcacaggaaggtttgga
gagatccgtgagctcattgttggaatgttggaaacatacacatatgaatctaccttgctg
aagacggccaatcgattattagacagggatctgtacggctcggtgaagaacttaactatg
gctgccaatagagggctcatgcctcgtagagagagctgcatgatatgtgggaagaattat
tcatattctaccgagtctgataacttactgatcttcagctgcggtcatacttaccattca
acctgcctgcagactgctggctgttcagccatgatagatgggcagagacactggacatgc
ttacagtgctattccgcaaggagaggggcggcgcttacacccaacaggaggccacgcctc
ttcagctcaggggaggagcctaagagaggaggcgggccaacatcaccaaggggtggagca
gcaggagattcaaaggatactgccgaagaggatgtttccttgaatccagaacaagaagct
tctcttgaaaatctcaagaaatggacagaaggaccatctagactggcaatcttgagcgag
gtactgctttcccagcgagccaatccttcttccaagggccttgtgagacccaatagtatt
ctgcatcaagaaagttttagactgagactagctccacctcccattgatgaatga
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