Lytechinus pictus (painted urchin): 129258776
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Entry
129258776 CDS
T09066
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129258776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129258776
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129258776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
B12-binding_2
Motif
Other DBs
NCBI-GeneID:
129258776
NCBI-ProteinID:
XP_054753019
LinkDB
All DBs
Position
1:complement(12812423..12819764)
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AA seq
283 aa
AA seq
DB search
MPTDTKRIQGPDESQSTFLYKKRTDKLHQPLLEEGKRQDGRSPEEIRPIFLKAGVVSQAK
GSCYIEMKNTKVICAVYGPREVPRRDGFVINGQLRCEFKFATFASEVRQGHLTTSTEKDL
ALQVQQALEPAVCLHKIPKSQVDIFITVLENDGSVLSAAITCASIAVANAGIEMYDLVIG
SSVRQSGERLLLDPTAFDEAADSMATDDPQAIITVGFLPSINQVSCLVQKGQLQSEESIK
ALQQCIETCQRIYPVVYECLKKSVKKLKTSVGSPSPVDGFPVS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacaccaagcgcattcaaggaccagatgaatcgcaaagtacctttttgtat
aagaaacggactgataaactgcatcaaccgcttctagaggaaggaaagcgacaagatgga
agatcacctgaagaaatcagaccaatatttctcaaagctggggttgttagtcaagcgaaa
ggatcatgttatattgaaatgaagaacaccaaggtcatatgtgcagtgtatggaccaaga
gaggtgccaaggagagatgggtttgtcatcaatggtcagcttcgatgtgagtttaagttt
gctacctttgccagtgaagtgaggcaaggccatttaactacatccacagagaaggatttg
gcattacaggtgcagcaagccttagaaccagcagtttgcttgcacaagattcccaagtcc
caagttgatattttcatcacagtactagaaaacgatggcagcgttctttcagcagccatt
acttgtgcatccattgctgttgctaatgctggtattgagatgtatgaccttgtcattggg
agttcagtgagacagtcaggagaaagacttctgcttgatccaacggcatttgatgaagct
gcagattccatggctacagatgacccacaagctatcatcactgtcggattcctaccttct
atcaatcaagtctcatgtctggttcagaaaggacagctccagagtgaagaatccatcaag
gcattgcagcagtgtatagaaacatgtcagcgtatctacccggttgtgtacgagtgcttg
aagaaatctgtcaagaaactcaagacatcagtagggtcaccttcccctgtggatggattt
cctgtgtcatga
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