Lytechinus pictus (painted urchin): 129258896
Help
Entry
129258896 CDS
T09066
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129258896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129258896
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129258896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
129258896
NCBI-ProteinID:
XP_054753109
LinkDB
All DBs
Position
4:21275203..21316317
Genome browser
AA seq
934 aa
AA seq
DB search
MALQSTHQLSLDSSQEQGFISFLRSMPEKPETTFRVFDRTDYYTVHGQDAVFAAKEVFKT
LGVIKHLGSGPNKIESVVLSKKNFESVVRDLLLVRQYRIEVYSNQATGKGNSWTLAYKAS
PGNLSQFEEILFGSNDMSTSASVIAVKVAGESGQRIVGVGYADATLRELGVSEFADNDQF
SNLEALIVQLGPKECLLCSGGDPNNPEFAKLKHVVQRGGLLISDRKKADFNSKDIVQDLN
RLLKVGRNAEQVNSKALPEMDKTNAMGSVSALIKYMELLGDETNFGQFKLMTFDLSQYMK
LDAAAVTALNLASTGPERDVNRGMSLTKLLNKCKTAQGQRLLGQWIKQPLLDKNRIEERL
DLVETFFNDLELRQTLQEEPLKRIPDFQRLSKKFQHKRATLQDCYKVYQAVDYLPNLIEI
IEKHEGSKALLLRELFTNPLKEILMDFSKFQEMVESTLDLEQVENHEFLIKPDFDENLMV
LRTKMDELEDEIKGQINRVAKDLGLEANKTIKLESNNQLGYFFRVTRKEEKALRNSNKYS
TIDTNKNGVRFTNSKLKSLNEEHMAAKEEHNETQKAVVDEIIGIASGYVEPMLSMNDITA
QLDVLVSFAHVSAGAPISYVRPTLHDQGEGILRLAQSRHPCLEMLDEVAFIPNDVTFEKD
KQMFHIITGPNMGGKSTFIRQVGMVVLMAQIGCFVPCEKAEVSIVDCILARVGAGDCTLK
GVSTFMAEMLETASILRSATSNSLIIIDELGRGTSTYDGFGLAWAISEYIATNNCGMCLF
ATHFHELTALADAVPTVNNLHVTALTSHDQLTLLYKVKPGVCDQSFGIHVAELAHFPQKV
IDFAKERAAELEDFQSIASSVSTSIEGLDEPAAKKRRLDKQEGEAIIQDFMSKVKAIPLD
ELSEDEVMSRIQSLKADVQAKKNSYIEELLSRGT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctctacaatcgactcatcaactttctttggattcaagtcaagaacaaggatttatc
tcctttttacgttcaatgccggagaaaccagaaacaacattcagagtgtttgacagaact
gattactacacagtacatggtcaggatgcagtgtttgctgctaaagaagtcttcaagact
ttgggtgttattaaacatttgggctcaggcccaaacaagattgaatcagtggtcctcagt
aaaaagaattttgaatctgtcgtgagagatctgctgctagtcagacagtaccgaatagag
gtgtatagtaaccaggcaacaggcaaaggcaacagctggacactagcatacaaggcgtct
ccggggaacctgagccagtttgaagagattctcttcggcagcaatgacatgtccacttcg
gcttcggtcattgcggtcaaggtggccggagagagcggacagaggatcgtcggggtgggg
tacgccgatgcgacgttgagggagctcggagtgtcggagtttgcggataatgaccagttt
tcaaaccttgaggcactcattgtacagcttggccccaaagaatgtctgctgtgctccggt
ggtgaccctaacaatcctgaattcgcaaagctgaagcacgtagtccagcgtggtggattg
ctcatctccgatcgtaagaaggcagatttcaattccaaggatatcgttcaggatttgaat
cgtcttctgaaggtcggcagaaacgcagaacaagtcaacagtaaagccctccctgagatg
gataaaacaaatgccatgggatctgtgtcagctcttatcaagtatatggagctcctggga
gatgagactaactttggacaattcaagctgatgacctttgacctgagtcagtatatgaag
ttggatgctgctgctgtcacagctcttaacctcgcatcaactggtccagagagggacgtc
aaccgaggaatgagtctgacaaagcttctcaacaaatgtaaaacagctcagggtcaaagg
ttactaggacaatggatcaagcagcctctgctcgacaaaaatagaatcgaggaaaggcta
gaccttgttgagacattcttcaacgacctggagctacgacagacattgcaagaagaaccg
ctaaagaggatcccagacttccaacgcttgtccaagaagttccaacataagagggcgaca
ttacaggactgctacaaggtttatcaagctgttgattacctcccgaacctgattgagatc
atcgagaaacacgaaggaagcaaggcccttctgctgagggaattattcaccaaccctttg
aaggagattttgatggacttttcaaagttccaggagatggttgagtcaacccttgatctt
gagcaggttgagaatcatgaattcctcatcaaaccagactttgatgaaaacttgatggtc
ctcagaaccaagatggatgaactggaggatgagatcaaaggtcagataaacagggttgcc
aaggatcttggtttagaagccaacaaaaccatcaaactggagtctaataaccaacttggt
tacttcttcagagtcacacgcaaggaggagaaagctctaagaaacagcaacaagtattcc
accatcgacaccaacaaaaatggcgttcgcttcaccaactccaagctaaaaagtttgaac
gaggagcacatggccgccaaggaagaacacaatgagactcaaaaagctgtagtggatgaa
atcataggcatagcatctggatatgtggagcctatgctaagtatgaatgacatcactgca
caactggatgtacttgtcagctttgcacacgtatctgccggtgctcccatctcctacgtc
cgacctacgcttcatgaccagggcgagggcatacttcgccttgctcagtcgagacatccg
tgtctagaaatgcttgatgaggtggccttcatacccaatgatgtgacctttgagaaagac
aagcagatgttccatatcatcaccgggccgaacatgggcggcaaatctactttcattaga
caggtcggtatggtggtcttgatggcccagatcggttgcttcgtaccctgtgagaaagca
gaggtatccatcgttgactgtatcctggccagggtaggagcgggagattgtacgcttaaa
ggagtctcaacattcatggctgagatgctggagactgcatcaatcctcagatctgctaca
agcaactcattgatcatcattgatgagctaggacgtgggacctccacatatgacggattt
ggactggcatgggccatttcagaatatattgccactaataattgtggcatgtgcctgttt
gcaacccacttccatgagttgactgcccttgctgacgctgtaccgacggtcaataacctt
catgttacagctctgacatcacacgatcagttgactcttctttacaaagtcaaacctggt
gtttgcgatcagagttttggtatccatgtcgcagagcttgcccactttcctcagaaagtg
atagactttgccaaagagagggccgcagagctagaagacttccagagtatcgcatcgtcg
gtttcgaccagtatagaaggcttggatgaacccgcggccaagaagcgcagactagataag
caggaaggggaagccataatacaggatttcatgtcaaaggtcaaggccattcctctagac
gagctctccgaagatgaagtcatgagccggatacaatccctgaaggcagatgtacaagca
aagaaaaactcctacattgaagaattgctttccagaggaacctag
DBGET
integrated database retrieval system
