Lytechinus pictus (painted urchin): 129258940
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Entry
129258940 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129258940
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129258940
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Helicases
129258940
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
129258940
NCBI-ProteinID:
XP_054753164
LinkDB
All DBs
Position
4:complement(25298545..25320708)
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AA seq
852 aa
AA seq
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MKKRGVNNPGKGRSSKSKQKKSGRNEGKMALKKLQLERKEINQLQDQYSQIDPKEIETFS
DFPLSKRTLSALEEAGYKVPTEIQKGAIGLALQGHDVLGAAKTGSGKTLAFLIPILECLY
RNSWSVPDGLGALVISPTRELAYQTFEVLCKVGSKHDFSAGLIIGGKDLKTEMERIPKTN
IVVCTPGRLLQHMDETACFESLNLKMLVLDEADRILDLGFQKTMDAILDHLPCERQTLLF
SATQTKSVRDLARLSLLEPKYVAVHEHHTHSTPVQLDQSYIVCELEQKLDVLYSFLKAHL
KQKILVFMSSCKQVKYVFEVLVKLNPGITVMGLYGSMHQLRRRVGVQXVLARDSARILAT
DIAARGLDFPAVNWVVQLDCPEDSSTYIHRVGRTARYEKDGEALLVLLPSEEDAMVAEME
KRKIPVEKIEVNPNKKFAIEKKLQSFCAQSVDLKQSAQRAFIAYLKSVYLMKNKDIFNVH
VLSLDNFARSLGLAVAPRVRFIQNAEKRKQEQSKKSNKNQQRLLETTSKTTTESNRTLQK
DSQKDEIRRDERRKGRTEDEIDESEEEDESDDEEAPGAGRDGEGGYGFHDDADEEDDLLV
KKDIDPKQISAEDANDDDLLAPGRRSKKSEKPLTKYALAKKIRKKNLQVNTKKVFDEEGE
VEAQWPPAQPNVASRLHGDEEEEDGGGIDIEKAKKFMEEEDKHDKQLFKDRIKQKHLERK
LKEKQLKKSNRKKQDSGDEDEGVSLGISLDDHQEFDPMSLPDPDVYSAFVSDDDRDANSD
KDEEEIGSQKQSQKKSKPSSSPTKRKTVKEKSERKKKRKMMDVEEDDVAMDTGLSLEDDE
QLALHMLSVNRF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgtggggtgaataatcctggtaaaggtcgttcttccaaatcaaaacagaag
aaaagtgggagaaatgaaggaaaaatggctcttaagaaattgcaactggaaagaaaagag
attaatcaacttcaggatcaatacagtcagatcgatcccaaagaaatagagacattctct
gacttcccactgagtaaaagaacgctgtctgctcttgaagaggctggctacaaggttcct
actgagatccagaaaggggcgataggtctggccttacagggccacgatgtccttggtgca
gccaagaccggttctggcaagactctggcattcctgattccaatattggagtgtctctac
cggaactcctggtctgtacccgatggtcttggagctcttgtcatctcacctacgagggag
ctagcttatcagacgtttgaagtactgtgtaaagtaggatcaaagcatgacttctccgct
gggctcatcatcggaggaaaggacttgaagactgagatggagaggatcccaaagaccaat
attgttgtgtgtaccccagggagactcctccaacacatggatgaaacggcctgctttgag
agcctaaatctgaagatgctagtccttgatgaagcagatcgtattcttgaccttggtttt
cagaagacaatggatgccatcttggatcatcttccatgtgaacgacagaccttactcttc
tctgcaacccaaaccaaatcggtacgtgacctggcgagactcagccttctggaacccaag
tatgttgctgtccatgaacaccatactcacagtacaccggttcagttagatcagagctac
attgtatgtgagttggagcagaagctagatgtcttgtattctttcctcaaagcccattta
aaacagaagatcttggtcttcatgtccagttgcaagcaggtcaagtacgtatttgaggtc
cttgttaagttgaaccccggtattacggtgatggggctatatggttccatgcatcagcta
cggaggagggtaggggtacaatgagttctggccagagattcagcccgcattctagccact
gacattgctgctagaggattagactttcctgcagtgaactgggttgtccagctagactgc
ccagaggattccagtacctacatacatcgagtgggccggacggccaggtacgagaaggat
ggcgaggctctcctcgttctccttccatcggaagaggatgctatggtggctgagatggag
aaaaggaaaattcccgttgagaaaattgaagtcaatccaaacaagaagtttgctatagag
aagaaacttcagtctttctgcgcacagagtgtagacctcaagcaatcagctcagagggcc
ttcatcgcttatctcaaatcagtctaccttatgaagaacaaggatatctttaatgttcat
gtgctttctcttgacaactttgcaaggtctctcggtttagcagtggccccgagggtgaga
ttcatccagaatgcggagaagagaaaacaggagcagagcaagaaatcaaacaaaaaccaa
cagaggttattagaaaccacatccaaaactaccacagagtcaaacagaactttacagaaa
gactcacaaaaagatgaaattagaagagatgagaggagaaaaggaaggactgaagatgaa
attgatgaatcggaagaagaggatgagtcggatgatgaggaggccccgggagcaggaagg
gatggagaaggaggatacggtttccatgatgatgctgatgaggaggatgacttgctggtt
aagaaagacatcgatcccaaacagatttctgccgaagatgccaatgatgatgatcttctt
gctcctggtagacgttctaagaaatctgaaaaacctctgaccaagtatgccctggctaaa
aagatcaggaagaagaacctacaagtcaacaccaagaaggtctttgatgaagaaggagag
gttgaagctcagtggccaccagctcaacctaatgtagcatctcgtctccatggtgatgag
gaggaggaggatggaggaggcattgacatcgagaaggccaagaagtttatggaggaagag
gataaacacgataagcaactcttcaaagatcggatcaagcaaaagcacttggaaaggaag
ctgaaggaaaagcaattaaagaagtcaaacagaaaaaaacaagacagtggtgatgaggat
gaaggtgtcagtcttggtattagtctggatgatcatcaagagtttgatccgatgagcctc
ccagatcctgatgtctactccgcttttgtttctgatgatgatagggatgctaattctgac
aaagatgaagaagaaattggttctcagaagcaatcacaaaagaaatcgaaaccctcatca
agcccaaccaagagaaaaacagtcaaagagaaaagcgagaggaaaaagaaacggaagatg
atggatgtagaggaggatgatgttgccatggatacaggattatcgttagaggatgatgaa
cagttagcactccatatgctctctgttaatagattctga
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