Lytechinus pictus (painted urchin): 129258945
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Entry
129258945 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129258945
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129258945
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129258945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-RING_5
PHD
TPR_10
CMV_1a
RNPP_C
TPR_12
Motif
Other DBs
NCBI-GeneID:
129258945
NCBI-ProteinID:
XP_054753170
LinkDB
All DBs
Position
4:25859134..25899342
Genome browser
AA seq
1850 aa
AA seq
DB search
MREKRKPTTSQRLDAEKRQCLSWDMYSAADTASTEGQPSTSQVDEGIDPDMVFGVMSDVG
LRLVGDGTYEVPDQSSGVDLCPISDVSLHLGEDSPRNASDPVSDEEVIDLTGVKDVPFLT
EEVVCTEPEDVQYQFRVSRSKYDILEKEAAYSIKVHLDQPEEKNQEGLLCIMKMKLLPVS
PAFIPQPNPQLPTDGYSTLLLRDAPGLDFLVFHDEQTKNLPICKFSKKDRLLGRGSFLAF
AVEMDRRPSSSCLESFQELVKVKKGMLQLCIHDYDPASGCAVLDAWILSGIVSQPSFASQ
CPSKKRHLEYVPQLMNWYHGYPLPTNKKGKVHKRYDYNTLFDKVRQYHETQEVVEVIDVQ
HSILVPVLRPYQRDAVRWMVRRETMTQNDKGQLHILWRQFKTVDDRTLYYNPQSGEITDQ
MQEMPEDFPGGILADEMGLGKTVEVLALILANPRWTKDFSRGTATSSSLHDNPDGNHILR
EHSNNDNTSSSMQDNLPECASSVEDIPQGNDLSEEHSINNNAISSKQDKSRETASNVEDV
VNSRTEGTLTSSEIVDIPDVPSTSSSMQDKLSESVGTDHSSVEGSLDHRTAGTLISSGKI
ANPNVQEDVAIAVPNEQDINGTDGDTLQGRTVLHVGDDVSSFPMNKMDVRHTAAEEATET
HPSQESSELTGSNPNKGQHTQNVENSESQRPGEIMPSVIIDGVETRILALKVESEFESDI
DLCNSMINQQPQENNPFSEPNVQYASQAVNHGNSTTQNAIGVDSSMHLPGEEGMPLTVVK
EEQDNSSSVEMHEQLESPLEDVKETISESENPKVFECICGRYEQFIRLPACVQCLRCHSW
LHAACIGFDIHMRDKPNHDLQFWCPNCFPKVPPLESAATLIISPASISYQWVDEINRHID
SSTLKVMMYEGVKKEGYIQPQTLANCDIVITTYSTLRTELDYANLSQPGAEGRSQSSRYQ
TTPSPLPCVEWWRICLDEAQMIEYTTAKSAEMANRLSARNRWCVTGTPIQKSLDDLYGLF
LFLGVEPYWVKHWWDVLLSVPYSNGHREPLQKALCKIFWRSAKKDVLDQIALPPQREEIH
WLDFSPVEKYFYKTKHEECSVHFTFNSDKASIGPETKLSTLDRRSLQSLLGPLLRVRQAC
CHPRIVRGEFTALQKKKQLSMQDLLKTMITKAEIDSDGAHRQLVCAMNALAAVHCIKEEL
PEAAALYREVLKSAEEHKDKIKTDKLQILHATYNLDKILKDRPEVVPPSPGDGNLARRMV
SLRNQYLQKTAHLVSGSLQTVQPIRDKVVEQQEKLPGGPAWYLDGIQWAIYQGLGAELVK
RIKTELEAKSEVMGLANRFRDARGLQFILTNELEELAQLYESAWDGVASLQDRLHDKALL
AEATDCHLRPFKGKTKNTCPFCKVQDHLQRYEMKLFSFDVRNLEAVGLAGPSNADPNQDD
FNMMAGGPRGNWAISEHERALRILHSFLKSCSADDLTLEEGTIFLDMLEQQRKEFKPLRA
YWGAMRDRVAAMDELEMAMLRLRVKLPGEETDPASQPYIIEPLEVEQQRYRFLNDRMVAK
NDLKRKLGQLLYLQNLDKAQYNLKDGHNPEVCPICVRPLGGQWTVLQCGHCFCTECMETM
LMRVHIAGRQGSVKCAVCRLPTEGTDVSYVSVTLQPGSSEAAEERVVEESIKVEGDHSTK
IEAVVRTLKKIQMTEPGAKAIVFSTWSEVLELISKALTQNWINFKNAAKNGGQKYFHAAL
TDFKHDPDITVLLLPVHNGSKGLNLIEATHVLLVEPILNPASELQAIGRVHRIGQTKPTV
VHRFLIHETIEEKLHTYLSTHTIRDGLNSVETDTGDMTFSDLKGLFSSET
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaaacgcaaacctaccacgtcccaacgacttgacgcagagaagaggcaatgc
ctgtcatgggacatgtacagtgcagcggacaccgcctcaactgaaggtcagccaagcaca
agtcaagttgatgaaggcatcgatccagatatggtgtttggtgtaatgtcagatgtgggg
ctgcgtcttgtaggggatgggacgtatgaagtaccagaccaatcatctggtgtggacctg
tgccctatatcagatgtgagccttcatcttggagaggacagtccaagaaatgcatcagac
cctgtatcagatgaggaagttattgacttgacaggggtcaaggatgtcccctttcttaca
gaggaagtagtctgtactgagccagaggatgtccaataccagttccgcgtctcaaggtcc
aagtatgatatcttggaaaaagaagcagcctacagcatcaaggttcacttggaccaacct
gaagaaaaaaatcaggaaggtcttctctgcatcatgaagatgaaactgttgcctgtttct
cctgctttcattcctcagccaaaccctcaactcccaacagatggatacagtaccctcctc
ctgcgagacgcacccggtttggatttcctggtgttccacgatgagcagaccaaaaacttg
cctatctgtaaattcagcaagaaggatcgtctgctaggacgtggaagcttcctggcattc
gctgttgagatggacagaagaccaagctcctcttgccttgaaagcttccaagaacttgtc
aaagtgaagaaagggatgctccagctctgtattcatgactatgatcctgcgtctggatgt
gccgtgttagatgcttggatcctttccggtatagtttctcagccatcctttgcatctcaa
tgtccgtctaagaaacggcaccttgaatacgttccccaactgatgaactggtatcatgga
tatccactaccaactaataaaaaaggcaaggtgcacaaaaggtacgactacaacacgctc
tttgacaaagtgcgccagtatcacgagacacaggaggtagtggaggtgattgacgtccag
cactcaatccttgtcccggtcttgcggccgtaccagcgcgatgctgtccgctggatggtc
cggagggaaacaatgacacaaaatgataagggtcagctgcatatcctttggaggcagttc
aagacagtcgatgacaggaccttgtactacaacccccaaagtggcgagatcactgaccaa
atgcaagaaatgccagaggactttcctggtggaattttggctgatgagatggggcttgga
aagacagtggaagtcctggccttgatccttgctaatccaaggtggaccaaagacttctcc
agaggaacagctacctcatccagtttacatgataaccctgatggcaatcacattttgagg
gaacattccaataatgacaacacttcatcctccatgcaggacaacttaccagagtgtgca
agtagtgttgaagatattcctcaaggcaatgacctgtcagaagaacattccataaacaac
aatgctatatcttccaagcaggacaaatcacgagagactgcaagcaatgttgaagatgtt
gtgaatagtagaactgaaggaacattgacttcatctgaaattgtagacattcctgatgta
ccaagcacatcatcctccatgcaggacaaattgtcagaaagtgtaggaactgatcattct
tcagtggaaggttcattggatcatagaaccgcaggaacattaatttcatctgggaaaata
gccaatcctaacgtacaagaagatgtagctatagcggtaccaaatgaacaggatatcaat
ggaacagatggagatacccttcaaggaagaactgtgttacatgtaggtgatgatgtatca
tcattcccaatgaataagatggatgtgaggcatactgctgcagaggaagcaacagaaact
cacccaagtcaggaatcgtccgaactcacaggatcaaatcccaacaaaggacagcataca
cagaatgttgagaacagtgaaagccagaggccaggtgaaatcatgccatcagttatcatt
gatggggtggaaacaagaatccttgctctaaaagtagaatctgaatttgagtcagacatt
gatctctgtaactctatgatcaatcaacaaccacaagagaataacccattctcagaaccc
aacgtgcaatacgctagccaagctgtaaatcatgggaatagtactactcaaaatgcaata
ggagtggattcctccatgcatttaccaggggaagaaggaatgcctttgacagtggtcaaa
gaagaacaggacaattcaagttcagttgagatgcatgaacaacttgaatcaccattggaa
gatgtgaaagagacaatatcagaaagtgagaaccctaaagtctttgagtgtatctgtggt
cggtacgagcaattcatccgtttaccagcgtgcgtgcagtgcctgcgatgtcattcctgg
ctccatgctgcatgcattggctttgatattcacatgcgggacaaacccaatcatgacctg
caattctggtgtccgaactgctttcccaaggtgccaccacttgaatctgctgcaacgctg
atcatttcaccagcctccatatcttatcagtgggttgatgagattaataggcacatcgac
tcatccaccctcaaagttatgatgtacgagggtgtaaagaaagaaggctacatccaacca
caaacccttgcgaattgtgacattgtcattacgacctacagcacactccgcacagagctg
gactatgctaatctttctcaaccaggtgccgaggggcgtagccaaagctcgcggtaccag
accacgcccagtcctttaccctgcgtagagtggtggaggatttgcctggacgaggcacag
atgattgagtacacgacggctaagtcagctgagatggctaacaggctttccgcaaggaac
agatggtgtgtgactggaacgcctatccagaagagtcttgatgatctgtatggccttttc
ttgtttcttggggttgaaccttactgggtgaagcactggtgggatgtacttctaagtgtc
ccttacagtaatggccacagggaaccactacagaaggcactttgcaagatcttctggcgc
tctgccaagaaggatgtccttgatcagattgcacttccaccccagagggaggagatccac
tggttggatttctcacctgttgagaagtacttctacaagacaaaacatgaggagtgctct
gtccacttcacatttaattctgacaaggccagcatcggtcctgaaaccaagctctcgacc
cttgatagaagatctcttcagagtctattgggacctctcctgagggttcgccaggcctgc
tgccaccctcgcatcgttaggggtgagttcaccgccctgcagaagaagaagcagcttagc
atgcaggatctgctgaagactatgataaccaaggctgagatagacagtgatggggcccat
cgtcagctggtctgtgccatgaatgcattggctgcggtacactgcatcaaggaggagcta
ccggaagcggctgccctgtatcgtgaagttctgaagtcagctgaagagcacaaagacaag
atcaagacggacaagctccagatactgcacgctacctacaaccttgacaagatactcaag
gatagaccagaggttgtcccacccagcccaggtgatggcaatcttgctagaaggatggtg
tccctgaggaatcagtacttgcagaaaacggctcatcttgtaagtggtagcttacagacc
gttcaaccaatcagagacaaggtcgtagagcaacaggagaagctcccgggtggcccagca
tggtacctggatggcattcaatgggccatctaccagggattgggagcagaactggtcaaa
agaatcaagactgaactagaggcaaagagtgaagtcatgggattagctaacagattccga
gatgcaaggggacttcagttcatcctgaccaatgagcttgaggagctagctcaactctat
gagtcggcctgggacggagtagctagtctacaagacagactccatgacaaagctcttcta
gctgaagcaacagactgccatctaagacccttcaaaggaaaaacaaagaacacatgtcca
ttttgcaaggttcaggaccatctgcaaagatatgagatgaaactcttctcatttgatgtc
agaaatctggaggcagttggattggctggtccatccaatgctgaccccaaccaagacgac
ttcaacatgatggccggtggaccccgtggtaactgggctatcagtgaacacgagagggcg
ctgcgtatcctgcacagcttcctgaagagctgcagtgccgatgacttgacgctggaggag
ggcaccatctttttggacatgcttgaacagcaaaggaaagaattcaagccgctgagagca
tactggggtgccatgcgtgacagagtggcagccatggacgagttggagatggcaatgctg
aggttaagggtcaaactaccgggagaagaaacagatcccgcctcccagccttatatcatt
gaaccattggaggttgaacagcagaggtataggttcctgaatgaccgtatggtcgccaag
aatgacctcaagaggaagctaggtcagttgctctacctgcagaatctggacaaagctcag
tacaacctcaaggatggtcataaccccgaggtctgccctatctgtgtcagacctcttggc
ggtcagtggactgtccttcagtgtgggcactgtttctgcaccgagtgcatggagaccatg
ctgatgcgtgtccacatcgccggccgtcagggttcggtcaagtgcgctgtctgtcgcttg
cctacagagggcacggacgtctcctacgtcagcgtgacgctgcagccgggttcctcggag
gcggcagaagagagagtcgtggaggagagtatcaaggtcgagggggatcactcgacaaaa
atcgaagcggtggtgagaactctgaagaagattcagatgacggagcctggagccaaggct
attgtgttttcaacttggtcagaggtccttgaactcatctcaaaagctctgactcagaac
tggatcaactttaaaaatgcggcgaagaatggaggccaaaaatattttcatgctgcatta
acagacttcaagcatgatccagacatcactgtcctccttctaccggtccataacggtagc
aaaggccttaatcttattgaggcaacccatgttcttttggttgaacccattctcaatcca
gctagcgaactgcaagccatcggcagggtgcatcgtatcggacaaacaaagccaacggtt
gtgcatcgcttcctcatccatgaaaccattgaagagaaacttcatacctacctcagtaca
cacacgatcagagatggactcaactcggtggagactgatactggagacatgaccttctcc
gacctcaaggggttattctcatcggaaacttaa
DBGET
integrated database retrieval system
