Lytechinus pictus (painted urchin): 129258997
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Entry
129258997 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129258997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129258997
Spliceosome [BR:
lpic03041
]
Complex C
Other components
Step II factors
129258997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NWD2_C
NBCH_WD40
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
129258997
NCBI-ProteinID:
XP_054753238
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All DBs
Position
4:complement(29629038..29647797)
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AA seq
578 aa
AA seq
DB search
MAAISALQAYGSDESDGDISDKESNSEDATAHLRPLEKDRTIKSLQVKLQLNAAPTVDET
SDFGSNPYHQPLDPLTKTVSYNPQYDQMYKPQAGPVNPFKTQQQTAAKNTLSGYVEPAHL
NPFHFENQRRTFSSYGFAVDPSVDTGGKHIVSNKEGTKPEEGKTVFEKVELREGDKRKRV
KNKDAADIEGFEGPWXKYQDEKTVAKPSEEEQTELDEILAKRAKRGKMMDDKPAEEKTTL
HIKDAYDYQGRSYLHIPQDLDVDLRSELPPDKCYLPKKTIHQWTGHTKGVAAIRLLPISG
HLLISCGMDSKIKLWEVYNQRRLVRTFSGHKQAVRDVCFNNDGTKFLSAAYDRYIKLWDT
ETGQCIEKFTSRKVPYCVKFNPEEDKQHIFVAGMSDKKIVQWDIRSNEIVQEYDRHLGAV
NTITFVDNNKRFVTTSDDKSLRVWEWDIPVDFKYIADPSMHSMPSVSLSHNGKWLGCQAM
DNQIVIYSAINRFRQNRKKIFKGHMVAGYACQMDFAPDMSYIVSGDADGKLNVWDWKTTK
LYTKLKAHDGVCIGCLWHPHETSKVITCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatttcagctttgcaggcttatggaagtgacgaaagtgatggagatattagt
gataaggagtccaattctgaagatgcgacggcacatctcagaccacttgagaaggatcgg
accattaaatctttgcaagtgaaattacaattgaacgcagcaccaaccgtggacgaaaca
agtgactttggaagcaacccctaccaccagccactagacccattaacaaagactgtgtct
tataatcctcagtatgatcagatgtacaagccacaagcaggacctgtgaatccattcaag
acacaacaacagaccgctgccaagaacactctatctggctatgtagaaccagcccatctc
aatcctttccattttgagaaccaaagaaggacattctcaagctatggttttgctgttgac
cccagtgttgatacaggtggaaagcacattgtctcaaacaaagagggcaccaagcctgaa
gaaggtaagacagtctttgagaaggttgaattgagggaaggggacaagcggaagagggtg
aagaacaaagatgccgcagacatagagggctttgagggtccgtggnggaaatatcaggat
gagaagacagtagctaaaccatcagaggaagagcagacagagttagatgagattctcgct
aagagagctaagagaggcaagatgatggatgataaaccagccgaagagaagactacacta
cacatcaaagatgcctacgactaccagggtcgatcctaccttcacataccccaagacctg
gacgtcgatctcaggtctgagctgcctccagacaagtgctatctccccaagaagaccatt
caccaatggactggtcacactaaaggagtggcggccatcaggctcttgccaatctctgga
catcttcttatctcctgtggcatggacagcaaaatcaagctatgggaggtatataaccag
aggaggttagtgagaactttctcaggtcacaaacaggcagtcagggatgtgtgctttaac
aacgatgggaccaagttccttagcgctgcttatgatcgctacatcaagctctgggacaca
gaaacaggacaatgtattgagaagtttacaagtcgtaaggttccgtactgcgtgaagttc
aacccagaggaagacaaacaacacatctttgtcgctggcatgtcagacaaaaaaatagtt
cagtgggacattagaagtaatgagatcgttcaggaatacgaccgtcacttgggtgctgtc
aacaccatcacgttcgtcgataataacaaacgttttgtgacgacatccgacgacaagagt
ttgagggtgtgggaatgggacatacctgtagatttcaagtacattgcagaccctagcatg
cacagtatgccgagtgtttcactaagtcataatgggaagtggctgggttgccaggcgatg
gataaccagatcgtcatctacagcgccatcaataggttccgacagaacaggaaaaagatc
ttcaaaggtcacatggtcgctgggtatgcttgccagatggactttgcccccgacatgagt
tacattgtatctggagatgctgacggaaaattgaatgtgtgggactggaagaccacgaaa
ctgtacaccaagttgaaggcacatgacggcgtttgcatcggctgtttatggcaccctcat
gaaacgtcaaaagttataacgtgtggatgggatggacttataaaactctgggactga
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