Lytechinus pictus (painted urchin): 129259098
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Entry
129259098 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: trifunctional purine biosynthetic protein adenosine-3-like
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic00230
Purine metabolism
lpic00670
One carbon pool by folate
lpic01100
Metabolic pathways
Module
lpic_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
129259098
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
129259098
Enzymes [BR:
lpic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
129259098
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
129259098
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
129259098
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp_3
ATP-grasp
ATP-grasp_4
ATP-grasp_2
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
129259098
NCBI-ProteinID:
XP_054753340
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Position
4:36164520..36179008
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AA seq
1014 aa
AA seq
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MTDKVLVIGSGGREHCLAWKLAQSSQVAQVLVAPGNAGTANSEKITNMGPDVPTGNYPAL
ASWCQENCISLVVVGPEAPLAAGIADDLAEAGIPCFGPSRAAAEIESSKVFAKSFMDNCK
IPTARWKSFTEVEEACKHINTAPYKALVVKANGLAAGKGVVVASSTEEACDAVRNIIKDK
LFGAAGENVIIEELLEGEEVSVLAFCDGSHFESMLPAQDHKRVGEGDHGPNTGGMGAYCP
CPQVSRQVIHQIDEEIIQRAVDGMKEQGRPYKGVLYAGLMITKDGPRVLEFNCRFGDPET
QVVLPLLKSDLYATMKACVTGDLPKAKPSFHDDRCCVAIVQASGGYPASYKKGYEITGLD
EIASQPDMMVIHAGTAVKDGKVVTSGGRVLAVVASARDLVTAAAMANEGAKTVKFEGSFH
RTDIAKRVCDFLTGNRSSGLTYSGSGVDITAGNSLVQAIKPLAKATARSGCDAALGGFGG
LFDVRAAGYKDPILVSGTDGVGTKLKIAQACNLHQTIGQDLVAMCVNDILAHGAESLFFL
DYFSCGKLEVGVARDVVGGVAEGCKMAGCALLGGETASMPWPVSPNKFDLAGFFRTVAVE
KGQDMLPRVDEIQAGDVILGVASSGIHSNGYSLVRRLVEQEGLDFKDPCPFRDGTTLGEA
LLTPTRIYSKTLLPGIRSGCVKAFAHITGGGLLENIPRIMPGSMAVQLDASKWEIPSVFG
WISHRGGVEEMEMARTFNCGVGGVLVVRSEDEGAVLEMVRQSGETAWRIGQVVPKCGDGA
GVSISNLSSSLVRSYSPAMNGVQEGGAERKMRVAVLISGTGTNLQALINHTKDPKKASRA
EICLVISNIPDVLGLERAKKAGIPTKVICHKGLSRVDFDMKVHDALQAANIEFICLAGFM
RILSGEFVNRWHGRLINIHPSLLPSFKGMNAHKMVLEAGVRLSGCSVHYVVEEVDAGAIL
VQESIPVLAGDTEPTLQERVKTAEHVAYPRALELIARGQASLGTEGKVVWKLDS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaagttcttgtgattggtagtggagggagggagcactgtctggcatggaag
ctagcccagtcatcgcaagtagcccaggtcctggttgccccaggaaatgcggggacagcc
aacagtgagaaaattacaaatatgggaccagatgttccaacaggtaactaccccgcccta
gcctcctggtgccaagaaaactgcatcagtctggtggtggtgggacctgaagcgcctctt
gctgcaggaatcgcagacgacctcgccgaggcaggcatcccgtgctttggcccctcaagg
gcagcagccgagatcgaatccagcaaggtctttgccaagagcttcatggataattgcaag
attccaactgctaggtggaagagtttcacagaggtggaggaagcctgtaaacacattaat
accgccccctataaagccttggtagttaaggccaatgggttggccgctggtaaaggagta
gtcgttgcttcaagtacagaagaagcttgtgatgctgtcaggaacattataaaggataaa
ttatttggtgctgcaggagaaaacgtcatcatagaagaactcttggaaggtgaagaagtt
tcagttctggcattttgtgatggtagccattttgagtcgatgcttccagcacaagatcac
aaacgggttggagaaggagaccatggtcctaatacaggtggaatgggagcgtactgtcct
tgcccacaggtgtcaaggcaggttattcatcagatagatgaggagatcattcagagagca
gtagatggtatgaaggaacaagggaggccatacaaaggagtcctgtatgcaggcctgatg
atcaccaaagacggcccgagggttctggagttcaactgtcgcttcggagaccctgaaacc
caggtcgttctgccgttgctgaagagtgatctctatgctaccatgaaagcctgtgtgact
ggagacctgcccaaggccaagccaagtttccatgacgaccgatgctgcgtggcaatcgtt
caggccagtggtggctacccagcatcgtacaagaaaggctatgagattacaggattggat
gagatagccagccaaccggacatgatggtcatccacgcaggcaccgccgtcaaggatggg
aaggttgtgacctcaggtgggcgtgtcctagcagtggtagcctcggcaagggatctggtg
acagcagccgccatggccaatgagggggcaaagacagtcaagtttgagggaagctttcac
agaacggatatagcaaaaagagtatgtgacttcctaactggtaacagatcatcaggttta
acatacagtggcagtggagttgacatcactgctggtaattcattagtccaagctatcaaa
cctctagccaaagctacggccagatcaggatgtgatgccgccctcggggggttcggaggg
ctctttgatgtgagagccgctggctacaaggaccctattctagtatcaggtactgacggc
gtcggcacaaaactgaagattgctcaagcctgcaaccttcaccagacgataggccaagac
ctggttgccatgtgtgtcaatgatatcctagcccatggagcagagtctctcttcttcttg
gactacttctcatgtgggaaactagaagtgggcgtggcaagggacgtggtgggaggcgtg
gccgaggggtgtaagatggctggctgtgccctgcttggtggtgaaaccgcatcaatgcca
tggcctgtgtcacccaataaattcgaccttgcagggtttttccgtactgtggcggtagag
aaagggcaagacatgcttccgagggtagatgagatccaagcaggtgatgtcatcctgggc
gtggcatcgtctggtatccatagcaacggctacagtctggtgaggaggttggtcgagcag
gaggggctggacttcaaggatccttgtccttttagagatggaaccactttgggtgaagca
ctgttgaccccaactagaatctactccaagaccctactccctggcatccggtccggctgc
gtcaaggcctttgcacatatcaccggtggggggcttctggagaacatccccaggataatg
cccggttccatggctgtccaattagatgcctccaaatgggagattccatcggtgtttggg
tggatctcacatcgaggaggggtggaggagatggagatggccaggacgtttaactgcggc
gttgggggcgtcctggtggtgagatcggaagatgaaggcgctgttttagagatggtgaga
caaagtggagagacggcatggaggattggtcaggtggtgccgaaatgtggagatggtgca
ggagtatcaatctccaacctctcctcatccctggtccgatcttactctcctgctatgaat
ggtgtccaagaaggcggagctgagaggaagatgagagtagctgttctcatctcaggcaca
ggtacaaatcttcaggcccttatcaatcacacaaaggatccaaagaaagcttctagagct
gagatctgtcttgtcatctctaatattcctgatgtattagggttagagagagcaaagaaa
gctggtataccaacaaaggttatatgtcacaaaggcctaagcagagtagattttgacatg
aaagtccacgatgctctccaagcagctaatatagaattcatctgccttgccggttttatg
cgtattctcagtggagagtttgtcaaccggtggcacggacgactcatcaacattcatccc
tccctcctgccgtccttcaagggaatgaacgcccacaaaatggtcttagaggctggagtg
agactatcgggatgttcggttcattatgtagtggaagaggtagatgctggagccatattg
gtccaggagtccatccccgtgttggcgggggatactgaaccaaccctacaggagcgtgtg
aagacagcagaacacgtcgcgtaccctcgcgctctggaactgatcgcaaggggtcaggcc
tcgctggggacagaggggaaagtggtttggaagttggattcatag
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