Lytechinus pictus (painted urchin): 129259103
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Entry
129259103 CDS
T09066
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03082
ATP-dependent chromatin remodeling
lpic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129259103
03083 Polycomb repressive complex
129259103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpic03036
]
129259103
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
129259103
Histone modification proteins
HAT complexes
HATB complex
129259103
HDAC complexes
Sin3A-HDAC complex
129259103
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
129259103
PRC2.2
129259103
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
129259103
Heterochromatin formation proteins
Other heterochromatin formation proteins
129259103
Chromatin remodeling factors
NuRD complex
129259103
NuRF complex
129259103
NuRF complex (fruit fly)
129259103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
NBCH_WD40
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
129259103
NCBI-ProteinID:
XP_054753348
LinkDB
All DBs
Position
4:36462526..36477426
Genome browser
AA seq
428 aa
AA seq
DB search
MAEKDNETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTSQWLPDVQKPEGK
DYSIHRLVLGTHTSDEQNHLVIASVQLPNDDASFDAAHYDSEKGEFGGFGSVSGKIEIDI
KINHEGEVNRARYMPQNATIIATKTPSSDVLVFDYTKHPSKPDLNGQCRPDLRLRGHSKE
GYGLSWNPNLHGHLLSASDDHTICLWDINDKPKENRVVDAKTIFTGHSAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRVSNLAKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPDTSAA
DLEQQTAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagacaatgaaacgtttgatgatgctgttgaagagagggtgatcaacgaa
gagtataagatctggaagaagaacacaccattcctctatgaccttgtaatgacccatgcc
cttgaatggcctagtttgacctcccagtggcttccagacgtccaaaagcctgagggtaaa
gattattccatccatcgtctagttcttggtacacacacatctgatgaacagaatcaccta
gtcatagccagcgtccagcttccaaacgatgatgctagctttgatgcagcacactatgac
agtgagaaaggagaatttggagggtttggttccgttagcggtaagatcgagatcgacatc
aagatcaaccacgagggagaagtaaacagagcacgttacatgccacagaacgccaccatc
atagcaaccaagactccaagcagtgatgtactggtctttgattacacaaaacatccatcc
aaaccagacctgaatggtcagtgcagaccagacctgagacttcgcggtcattctaaggag
ggatatggtctctcatggaaccctaatcttcatggccacctactcagtgcctcagatgac
cataccatctgcctatgggacatcaacgataagcctaaagagaatcgtgtggtagatgcg
aagactatcttcacaggtcattcagcggttgtcgaagatgtctcatggcatcttcttcac
gagagtctgtttggatcggttgccgatgatcagaagctcatgatctgggatacgagagta
agcaatcttgccaaagcaagtcattctgtggatgctcatactgcagaggtgaactgcttg
tctttcaatccatacagtgaatttattttggctactggctcggctgacaaaactgttgca
ttgtgggatcttcgtaatctgaaactcaagcttcactcattcgaatcgcacaaggatgag
atcttccaagtgcagtggtctccgcataatgagacaattcttgcttccagtggtaccgac
agaagactcaatgtatgggacttaagtaaaattggtgaggagcagtctcctgaagatgcg
gaagatggacctccagagcttctcttcatccacggaggtcacacggctaagatctcagac
ttctcatggaatcctaacgaaccctgggtcatctgctctgtctccgaagataatatcatg
caagtttggcagatggcggagaacatttacaatgacgaagatccagacacgtcagcggct
gatttagaacagcagactgcatcataa
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