Lytechinus pictus (painted urchin): 129259214
Help
Entry
129259214 CDS
T09066
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129259214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129259214
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129259214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Utp12
NBCH_WD40
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
ASA1
CFAP251_N
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IP5PC_F
WDR54
Beta-prop_Vps41
WD40_like
eIF2A
PROPPIN
PAC11
Utp21
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
Katanin_con80
Tricorn_2nd
DUF7356
DUF7084
Beta-prop_WDR19_2nd
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
129259214
NCBI-ProteinID:
XP_054753493
LinkDB
All DBs
Position
4:45084644..45108208
Genome browser
AA seq
942 aa
AA seq
DB search
MGLTKQYLRFVQSAVFGVVGTTKANVVFTKDHQFVAVSAVEHVIIWSLKRAEKVLLLEGS
KHEVTCLAQTDARPIIAVGYSDGSIKLFDSNNGDMIVTFNGHKTAVSTMHFDEHALRLAS
GSKDTDVIIWDVVNESGLYRLKGHRGMVTRVNFMAHHNIVISSSKDTFVKFWDLDTQHCF
KTLVGHRSEVWDFALLPDDKGLVTGTSGSDLQVWDITFQDELEGDDGDNKGPSPAKRQRR
TMNEDDDEEEDEDDDEEGDDNSILTCTKAGTILRKGSDRVVSLHIDSTGRILGCHGPSPN
LELFKVCNAQEQKKKLLKKQKRERKRSRGEDGDEVDVSNVKLTAEDKIQPLTNIKASAKL
RSFYSHMDRNGEVRLVTLLQNNTLEAYKVDLTADKPVGNKEHVISLAGHRHDVRTLSISS
DNTALLSAGGNAVKIWNRSNQQCIRTMKCGHVLSSIFAPGNRHCIVGNKAGQLEMFDIAS
GSLMESFEAHEGAVWSICLSPDKRGFVTGSADKTLKFWEFELVSSENDEGRTVRELSIVH
TRTLKMSDDVLCVKYSPDGRLVAASLLDSTVKVFFADTLKFFLSLYGHKLPVLNMDISSD
STLLVTGSADRNVKLWGLDFGDCHKSMFAHDDSVMCIGFLPDTHLFFTGGKDGKIKQWDG
DHFQQITTLEGHHGEVWCMAISPDGSFMVSASHDKSLRIWEKTEEPLVLEEEQEMERERK
YEESLNKEEQPIAGEPTGGEVSLPEKRTTETLKGAERLMEALNLYQEETAKMEDYKDRCK
AAGKELPPPDQHPILMAYGNLSPLRYVGDVIKKIKSSELEESLLVLPLDYVLQLLPLLET
LIQESREVELACRCLLFLLRIHHGQITSNHKLLPMIDRLRKTTLTKADKLRDTIGFNLAG
LRFLKDKLEAENEVQLFADATANYQTKKKKQKKRAERAIIKL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggattgactaaacaatacctacgctttgtacagagtgctgtatttggagtagttgga
acaaccaaagctaatgtggtgttcaccaaagatcatcagtttgttgcagtatctgctgta
gaacatgttatcatctggagcttaaagagagcagagaaggtactattacttgaaggcagc
aaacatgaggtcacttgtcttgctcagacagatgctcgtccaatcattgctgttggttat
tcagatggttctattaagctctttgatagtaataatggagatatgattgttacatttaat
ggtcataagacagctgtatctacgatgcattttgatgaacatgctcttcgccttgcttct
ggctcaaaggacactgatgtaatcatatgggatgttgttaatgagagtggtctgtataga
ttaaaaggtcatcgtggtatggtgaccagggttaacttcatggcacatcacaatattgtc
atctcaagttccaaggatacatttgtaaagttctgggatttagacacacagcattgcttc
aagacactggttggacacagaagtgaggtatgggactttgctctgctacctgatgataaa
ggactagtgactggaacatcagggagcgatcttcaagtatgggatatcaccttccaagat
gagctagaaggtgatgatggagataacaaaggaccatctcctgccaagagacaaagaagg
acgatgaatgaagatgatgatgaggaggaggatgaggatgatgatgaagaaggtgatgat
aatagtatattaacctgtaccaaagctggaaccatcctaaggaagggaagtgatagagta
gtatccttacacattgattccacaggaagaatactgggatgccatggtccaagccccaat
cttgagcttttcaaagtttgtaatgctcaggagcagaagaagaaactacttaagaagcag
aagagagaaagaaaacgatcaagaggtgaagatggtgatgaagtagatgtgtctaacgtc
aagctgacagcggaagataagattcaacctcttacaaatatcaaagcttcggcaaaactc
agatccttctattctcacatggatagaaatggagaagtgcgactggtaacccttctacag
aacaataccctagaagcatacaaggtggatcttacagctgataaacctgttgggaataaa
gaacatgttatcagtcttgctggtcatcgtcatgatgtcaggacactatcaataagctct
gataatacagctttgctttctgcaggagggaacgctgtcaaaatatggaacagatccaac
cagcagtgtatccgaaccatgaagtgtggtcatgtattatcatctatctttgctccagga
aacaggcattgcattgtgggtaataaggcaggtcaacttgaaatgtttgatattgcgtct
ggttcattgatggaatcattcgaggcacacgagggtgctgtttggtctatctgtttatca
cctgataagaggggctttgtgacaggaagtgctgataagactttgaagttctgggaattt
gaacttgtaagctcagagaatgatgaaggcagaactgtacgtgaattaagcattgttcac
accaggacattaaagatgtctgatgatgtgttatgtgtgaagtactctcctgatggtaga
ctagtagctgcatcactcctagatagcactgtcaaagtattctttgctgacacactcaag
ttctttctgtctctgtatggacacaaactaccagtgctcaacatggatatctcttcagat
agtacattgctggtaactgggtcagcagatcggaatgtgaagctatggggtctagacttt
ggtgattgtcataagtctatgtttgctcatgatgatagtgtaatgtgtatagggtttcta
cctgatactcatctgttcttcactggagggaaagatggaaagattaaacaatgggatgga
gatcactttcaacagataactacattagagggtcatcatggggaggtttggtgtatggct
atcagtcctgatggtagctttatggtgagtgcatcacatgacaaatctctgaggatatgg
gagaagactgaggagcctttggtattagaagaagaacaggaaatggaaagagagagaaaa
tatgaagagagtctcaataaggaagaacaaccgatcgcaggtgaacctacaggaggagag
gtatccttaccagagaagagaacaacagagacattgaaaggagcagagagattgatggaa
gctcttaatctttaccaggaagagacagctaagatggaagattataaagacaggtgtaag
gcagcaggcaaagagcttccaccaccagaccagcatcctattctcatggcgtatggaaac
ctttcacctctcagatatgtaggggatgttataaagaagattaaatcaagtgaactagaa
gagagcttattagtattacctctagactatgtgcttcagctattacctctgttagagact
ctcattcaagaatcaagagaagtggagcttgcttgtagatgtcttctcttccttctcagg
atccatcatggtcagataacatctaatcacaaattgctacctatgattgacagactgaga
aagacaacattaacaaaggctgataaactaagggacaccataggattcaatttagctggt
cttcgtttcttgaaggataagctagaagctgagaatgaagttcaactctttgctgatgct
actgctaattaccagacaaagaagaagaaacaaaagaagagagcagaaagagcaattatt
aaattatga
DBGET
integrated database retrieval system
