Lytechinus pictus (painted urchin): 129259459
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Entry
129259459 CDS
T09066
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129259459
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129259459
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Helicases
129259459
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
129259459
NCBI-ProteinID:
XP_054753722
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All DBs
Position
4:25328119..25346772
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AA seq
861 aa
AA seq
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CGRFILNKMKKRGVNNPGKGRSSKSKQKKSGRNEGKMALKKLQLERKEINQLQDQYSQIN
PKEIETFSDFPLSKRTLSALEEAGYKVPTEIQKGAIGLALQGHDVLGAAKTGSGKTLAFL
IPILECLYRNSWSVPDGLGALVISPTRELAYQTFEVLCKIGSKHDFSAGLIIGGKDLKTE
MERIPKTNIVVCTPGRLLQHMDETACFESLNLKMLVLDEADRILDLGFQKTMDAILDHLP
CERQTLLFSATQTKSVRDLARLSLLEPKYVAVHEHHTHSTPVQLDQSYIVCELEQKLDVL
YSFLKAHLKQKILVFMSSCKQVKYVFEVLVKLNPGVTVMGLYGSMHQLRRVAVYNEFCVR
DSAVLLATDIAARGLDFPAVNWVVQLDCPEDSSTYIHRVGRTARYEKDGEALLVLLPSEE
DAMVAEMEKRKIPVEKIEVNPNKKFAIEKKLQSFCAQSVDLKQSAQRAFIAYLKSVYLMK
NKDIFNVHVLSLDNFARSLGLAVAPRVRFIQNAEKRKQEQSKKSNKNQQRLLETTSKTTT
ESNRTLQKDSQKDEIRKDERRKGRTEDEIDESDDEEESDDEEAPGAGRDGEGGYGFHGDA
DEEEDDLLVKKDIDPKQISAEDANDDDLLAPGRRSKKSEKPLTKYALAKKIRKKNLQVNT
KKVFDEEGEVEAQWPPAQPNVASRLHGDEEEEDGGGIDIEKAKKFMEEEDKHDKQLFKDR
IKQKHLERKLKEKQLKKSNRKKQDSGDEDEGVSLGISLDDHQEFDPMSLPDPDVYSAFVS
DDDRDANSDKDEEEVGSQKQSQRKSKPSSSPTKRKTVKEKSEKKKKRKMMDVEDDDVAMD
TGLSLEDDEQLALHMLSVNRF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
tgcgggcgttttattctaaacaagatgaagaaacgtggggtgaataatcctggtaaaggt
cgttcttccaaatcaaaacagaagaaaagtgggagaaatgaaggaaaaatggctcttaag
aaattgcaactggaaagaaaagagattaatcaacttcaggatcaatacagtcagatcaat
cccaaagaaatagagacattctctgacttcccactgagtaaaagaacgctgtctgctctt
gaagaggctggctacaaggttcctactgagatccagaaaggggcgataggtctggcctta
cagggccacgatgtccttggtgcagccaagaccggttctggcaagactctggcattcctg
attccaatattggagtgtctctaccggaactcctggtccgtacccgatggtcttggggct
cttgtcatctcacctacgagggagctagcttatcagacgtttgaagtactgtgtaaaata
ggatcaaagcatgacttctccgctgggctcatcatcggaggaaaggacttgaagactgag
atggagaggatcccaaagaccaatattgttgtgtgtactccagggagactcctacaacac
atggatgaaacggcctgctttgagagcctaaatctgaagatgctagtccttgatgaagca
gatcgtattcttgaccttggttttcagaagacaatggatgccatcttggatcatcttcca
tgtgaacgacagaccttactcttctctgcaacccaaaccaaatcggtacgtgacctggcg
agactcagccttctggaacccaagtatgttgctgtccatgaacaccatactcacagtaca
ccggttcagttagatcagagctacattgtatgtgagttggagcagaagctagatgtcttg
tattctttcctcaaagcccatttaaaacagaagatcttggtcttcatgtccagttgcaag
caggtcaagtacgtatttgaggtccttgttaagttgaaccccggtgttacggtgatgggg
ctatatggttccatgcatcagctacggagggtagcggtgtacaatgagttctgcgtcaga
gattcagccgtactcctagccactgacattgctgctagaggattagactttcctgcagtg
aactgggttgtccagctagactgcccagaggattccagtacctacatacatcgagtgggc
cggacggccaggtacgagaaggatggtgaggctctcctcgttctccttccatcggaagag
gatgctatggtggctgagatggagaaaaggaaaattcccgttgagaaaattgaagtcaat
ccaaacaagaagtttgctatagagaagaaacttcagtctttctgcgcacagagtgtagac
ctcaagcaatcagctcagagggccttcatcgcttatctcaaatcagtctaccttatgaag
aacaaggatatctttaatgttcatgtgctttctcttgacaactttgcaaggtctcttggt
ttagcagtggccccgagggtgagattcatccagaatgcggagaagagaaaacaggagcag
agcaagaaatcaaacaaaaaccaacagaggttattagaaaccacatccaaaactaccaca
gagtcaaacagaactttacagaaagactcacaaaaagatgaaattagaaaagatgagagg
agaaaaggaaggactgaagatgaaattgatgaatcggatgatgaggaggagtcggatgat
gaggaggccccgggagcaggaagggatggagaaggaggatacggtttccatggtgatgct
gatgaggaggaggatgacttgctggttaagaaagacatcgatcccaaacagatttctgcc
gaagatgccaatgatgatgatcttcttgctcctggtagacgttctaagaaatctgaaaaa
cctctgaccaagtatgccctggctaaaaagatcaggaagaagaacctacaagtcaacacc
aagaaggtctttgatgaagaaggagaggttgaagctcagtggccaccagctcaacctaat
gtagcatctcgtctccatggtgatgaggaggaggaggatggaggaggcattgacatcgag
aaggccaagaagtttatggaggaagaggataaacacgataagcaactcttcaaagatcgg
atcaagcaaaagcacttggaaaggaagctgaaggaaaagcaattaaagaagtcaaacaga
aaaaaacaagacagtggtgatgaggatgaaggtgtcagccttggtatcagtctggatgat
catcaagagtttgatccgatgagcctcccagatcctgatgtctactccgcttttgtttct
gatgatgatagggatgctaattccgacaaagatgaagaagaagttggttctcagaagcaa
tcacaaaggaaatcgaaaccctcatcaagcccaaccaagaggaaaacagtcaaagagaaa
agcgagaagaaaaagaaacggaagatgatggatgtagaggatgatgatgttgccatggat
acaggattatcgttagaggatgatgaacagttagcactccatatgctctctgttaataga
ttctga
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