Lytechinus pictus (painted urchin): 129259613
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Entry
129259613 CDS
T09066
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129259613
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129259613
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
129259613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
AAA_25
AAA_22
AAA_30
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
129259613
NCBI-ProteinID:
XP_054753859
LinkDB
All DBs
Position
4:35693116..35729028
Genome browser
AA seq
1844 aa
AA seq
DB search
MEEMYEGDGDDDYKELEFDLQCLQIEDGAFQLDDFGDALPDDGLDDYVYDEFADGSFTTK
FVAGSLVKLPRGSTHVNKTQSEEVTIPPSDNAPMRDNKPVKISSLDQVGQLAFKGMKTLN
RIQSVVFDTAYNKSENLLICAPTGAGKTNIAMLTILHEARKHLNARGAVKHNEFKVVYVA
PMKALAAEMTRTFGSRLKPLGFSVRELTGDVQLTKKEMMDTHMLVTTPEKWDVVTRKSVG
DVALTQLVKLLIIDEVHLLHEDRGAVIESLVARTLRQVESYQNNIRIVGLSATLPNYKDV
AKFLHVNLKTGLFYFDGRFRPVPLQQTYIGVAKPARGGFTEQRKRMDGICYEKVRDLVDK
GHQVMVFVFARNATVKSANDLLDRARLHNDTDMFKAEENEEFNAAREEVQKSRNRQLKDL
FDSGFSIHHAGMLRQDRNLVERYFAAGLIKVLCCTSTLAWGVNLPAHAVIIKGTQFYNPD
KSKFEDIGILDVLQIFGRAGRPQYDTFGEGYIITSHDKLVHYLELMMDQTPIESQFIKRL
EDNLNAEVVLGTVSNVKEAVRWLSYTYMHVRKLATNKLLTRGDPDMKWYREQLIKDSAQA
LHRAKMVVYDKDCGTLDYTEIGRIASHFYIKQATILLFNASLKLCQTPEEILLLVSMAAE
FKQVKVRKEEEKELEQHRQYDCEVHVSAVKDSSGKVNVLLQTYISGGILNSFSLVSDTNY
VAQNSARIMRALFEIALHEGRPQLASNVLTLTKCIDQQMWSSKNPLRQLQSRDCNRLLNV
AGDTFDNSRLATMTSEQIGDIVHEFEHEVSKPDRIAIGTRIKQAVKEFPRLLLDATVQPL
STTVLQIRLKVTPDFVWNDRLQGYGTTNWWLWIEDSSAELMYHHEFFSITRQQVLNTEEQ
EITMTIPVSTSETLPAEINVKVVSDSWLGAETNLPLSLTTVVLPREKLSKFNVFRQLKPG
EEPKVLPKTTLQNFQHQQMFPFDDFNRFQRVLFSQLHTNADSFVFSDRFFGFLNLGFQSG
QIELAIFDVLSMPNPTPRELMSFNLYNVVYIAPLKPLLRRRFKDWRARFGDILGKKIYML
NGDLISDINTIRRADIILTTPEKWNAVCRRGHTIESVSLLILDQLQFLASNSGSSLEAMV
TRMKMRSSKLRIMALSTPMANSNDVAEWLDVKQGSSFNFKPTERPVPLQIVILGFSGKYY
HNRAAAMNKPIYLEIKATSKKKPAIVFVASKKQTSATAFELIAFLRSEKDPKMWLHDMTP
EEIADVCKDITDDNLKLSLTFGVGIHHTSLSIDDRRTVEQLYRAKHIQVLVATKNLAWAT
DLRARFVVVKGTEQYDAKSERYANMPVTDILQMVGRAGRHSDDSRGSAMVLVHDVKEHYY
NSVLKESAVAIESGHSVDSLAGHVNAEIAEGKIASVLDVERYLNKTFFYSRLSSNPSFYG
VEDSHTATIRPFRSTMAEEILMKLMDAECINTKSAPGGTTCEPTALGKIAAEHYVQPGTV
LKFRRSTRPTSLPDCLQVLSEAEEFSGTPVRSDEATSNRTLCYSLPRFGSTSFLGITCAH
SKAYLLLQAHVARADLPSKDYTIDTRTILDRIGMLIDALVEVSANKNSLSEVLLSMRSSQ
SIMQARWADESPLLTLPHVTRAIIPRFTIRKLDRVIRNDELLSEVISKCEGSKEVLQEML
QRDLDPLQIEEIWSVLGKLPTIRMDISISDEPTNTSFRRHGSRPLPTSINKERLSTITTT
AEAGQGYIIHINLRQRNKGAKRMSHTPRYPKQREVGWWVVLGETSTNSILAWKRIEHIFG
RTSVALPFKLPERKDTIQCSLHLVSDCYIGIDSEIQIPFQVKSF
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatgtacgagggcgatggcgatgatgattacaaagaattggaattcgatctc
cagtgtctgcaaattgaggacggtgctttccaactggatgactttggggacgccttgccc
gatgacggcttagatgactatgtctatgatgaattcgccgatggttcctttaccactaaa
tttgtggcaggatctttggtgaaattaccaagaggcagcacacacgtgaataaaacacag
tccgaagaagtcaccattcctccaagtgacaatgctcctatgcgtgataataaaccagtg
aagatatccagccttgaccaggttgggcaactagctttcaaaggaatgaagactctgaat
cgtatccaatcggtggtctttgacacggcatacaacaagagtgagaaccttctcatatgt
gcccctacgggtgcaggaaaaaccaacattgccatgttgactatcctccatgaagctcgg
aagcatctgaatgcacgaggtgccgtcaaacacaatgaatttaaggtcgtctacgtagct
cccatgaaggcccttgccgcggagatgacgcgcacctttggatctcgtctaaaacctcta
ggtttctcagtacgggaactcacaggggatgtgcagctcaccaagaaggaaatgatggat
actcatatgttggtgacgacccccgagaagtgggatgtggtgaccagaaagagtgtaggg
gatgtggccctgacccagcttgttaaactccttatcatcgatgaggtccacctcctccat
gaggatcgcggtgccgtcatcgaaagtctcgtcgcaagaacacttcgacaggtggaatcc
taccagaacaacatccggatagttgggctgtcggcaaccttgcccaactacaaagacgtt
gctaagtttctccacgtcaatctcaagaccggattgttctactttgatggccgattcaga
ccagtgccccttcaacagacgtacataggtgtggcgaaacctgcacgcggcgggtttacc
gaacaacgcaaaagaatggacggcatctgctatgagaaagttcgtgaccttgtggataag
ggtcatcaggttatggtgttcgtgtttgctaggaacgctacggtgaaatccgccaatgac
cttctggacagagcaagactccacaatgacaccgatatgtttaaagctgaagagaacgag
gagtttaatgctgctcgcgaagaggtgcagaaatcccgtaacaggcagttgaaggatctg
ttcgattcggggttttccatccaccatgccggcatgcttaggcaggacaggaacttggtt
gaacgctactttgctgcagggcttatcaaggttctctgctgtacatctacccttgcatgg
ggagtcaaccttccagcccatgcagtcattatcaagggcacacaattctacaaccctgat
aagtctaagtttgaggatatcggtatcctggatgtcctgcagatctttggcagggcaggg
cgccctcaatacgatacgtttggagaggggtacatcatcacttctcatgacaaacttgtc
cactatctggagctcatgatggatcaaacaccgatagagagtcagttcatcaagcgtctg
gaggacaatctcaatgcagaggttgttcttggcactgtgagtaacgtgaaggaagcagtt
cgatggctcagttacacatacatgcacgtgagaaagctggcaactaataagcttttgaca
aggggtgaccctgatatgaagtggtaccgtgaacagctcataaaggactcggcacaggcc
ctgcaccgtgccaagatggttgtttacgacaaagactgtggcactttggactatacagag
atcgggcgaatcgcaagccatttctacataaagcaagccaccatcctgcttttcaatgcc
tctttaaagttgtgccaaacccctgaagagatacttttgttggtgtcaatggctgcggag
ttcaaacaagtaaaggttcggaaagaagaagagaaagaacttgaacaacataggcaatat
gactgtgaggtccatgtgagcgcggtcaaggattcgtctggcaaggtcaatgttcttttg
cagacttatatcagtggaggaatcttgaatagcttttctctagtgtcggatacaaattat
gtcgcacagaactcagccaggatcatgcgagcattatttgagatagcccttcacgaaggg
cgccctcagttagcgtccaacgttctcaccctgaccaaatgcattgatcaacaaatgtgg
tcttcaaagaatcctctacgccagctgcaatcgcgtgattgcaatagacttctcaatgtc
gcaggagacaccttcgataatagccgacttgcaaccatgacttccgaacaaataggtgac
atagttcatgagttcgaacatgaagtcagcaaaccggaccgcattgccatcggaacacgc
atcaagcaggctgtcaaagagttcccccgtctactcctagacgctactgtccagcctctt
tcgacaaccgtcctccagatccgtttgaaggtcacgcccgattttgtgtggaacgacagg
ctccaaggctacgggacgaccaactggtggctttggattgaggattcatccgcagaactc
atgtaccatcacgagttcttcagcatcaccaggcaacaggtcctcaacacagaagagcaa
gaaattacaatgaccatacctgtttctacgtcggaaacgcttcccgccgagatcaacgta
aaagtggtatctgattcatggcttggcgcagagaccaacctgcctttgtccctcactaca
gttgttcttcctagagaaaaactctccaaattcaatgtgtttcgtcaactaaaaccagga
gaggagccgaaggtcctgcccaagacaacactccagaattttcagcatcagcagatgttt
ccttttgacgatttcaaccgtttccagagagtactctttagccagctgcacacgaatgca
gattcttttgtgttttccgatcggttcttcgggtttttaaatctagggtttcaaagtggc
caaatcgaactagccatctttgatgtgctgtcaatgccgaacccgacaccaagggaattg
atgagtttcaatctttataacgttgtctacatagcccccctgaaacctctcctacggcgt
cgcttcaaagactggcgagcacggtttggcgatatccttgggaagaagatatacatgttg
aatggtgatctcatttctgacatcaacacaatcaggagagcagacattattctgactacc
cctgagaagtggaatgctgtctgccggagaggacatactatcgaatccgtctctctcctc
attctggatcaacttcagtttcttgcatctaacagtggctcatcgctagaagccatggta
actcgtatgaagatgagatcatccaaactccgtattatggctctttccactccgatggca
aactccaatgatgttgcagaatggcttgatgttaaacagggttcctcgtttaacttcaag
ccgacggaacggcctgttcctctccagatagtcattcttggattctctggcaagtactac
cacaatcgagctgctgctatgaataagccgatatatctggaaatcaaggcaacctccaaa
aagaagcctgccattgtgtttgtagcttcaaagaaacagacttcagccacagcctttgaa
cttatcgctttccttcgatctgagaaggatccaaaaatgtggctccatgatatgacacca
gaagagattgctgatgtatgcaaggatatcacagatgacaatctgaaactctccctaacc
tttggggtcggtatccaccataccagtctctctatagatgatagaagaacggtagaacag
ctttaccgagcaaaacacatacaggtacttgtagcaaccaagaacctggcgtgggcgaca
gatctgcgtgctcgttttgttgttgtcaagggaacggagcaatacgatgccaagagtgag
agatacgcaaacatgcctgtgacagatatacttcagatggttggtcgtgcaggacgtcac
tctgatgattctagaggttcagctatggtactagtccacgatgtcaaggaacactattac
aatagtgtgctcaaagaatcggcggtagccattgaatcagggcattctgtggactccctg
gcaggtcatgttaatgcagagatagcagagggaaagatcgcatctgtgttggacgttgaa
agatacctcaataaaactttcttctatagcagactctcttccaacccaagtttctacggt
gtggaagactcccacaccgctaccatcagaccattccgctcaaccatggctgaggaaatc
ttgatgaaactcatggatgctgagtgcatcaatacgaagtctgctcctggcggtactacc
tgcgagccaacagcgctggggaaaatagcagcagaacactatgtacaaccaggaacagtt
ctgaagttcagacgctcaacaagacccacatccttgcctgactgtctccaagtcttgtcg
gaggcagaagagttttcaggaactccagtgcgttcagatgaagctacctcaaacagaaca
ctttgttactccttgccacgctttggctcaacaagttttttggggattacttgtgctcat
tccaaggcttacctgttactacaagcccatgtagcccgggcagatctcccgtccaaggac
tacacgatagatacaaggaccatcttggatcgcattggcatgctcatagatgccttagtt
gaagtttctgcgaacaaaaactccttgtcggaggtcctcctgagcatgcgcagtagccaa
tcaatcatgcaagccagatgggcggatgagtcccctctcctaaccctccctcatgtcacc
cgagccatcatccctcgtttcaccatcagaaaactggatagagtgattcgaaatgatgaa
ttgctgagtgaggtcatcagcaaatgtgaaggaagtaaagaagttcttcaggaaatgctc
cagagagatcttgatccacttcaaatcgaagagatctggagtgttcttgggaagttacct
acgatcagaatggatatatctatcagtgacgaaccaaccaatacatcattcagaaggcat
gggtctaggccacttcctacgtctataaataaagagaggttaagcaccataacaacgaca
gctgaggcaggccaagggtacatcattcacatcaacctgagacaacggaataagggagct
aagaggatgtctcataccccaagataccctaagcagagggaggtcggatggtgggtggtg
ctcggtgaaacaagcaccaacagcatcctggcttggaagagaattgaacacatctttggt
aggactagcgttgcccttccattcaagttgcccgaaagaaaagataccatacaatgctct
cttcatcttgtcagtgactgctatattggtatcgacagtgaaatccagataccattccag
gtgaagtcattttga
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integrated database retrieval system
