Lytechinus pictus (painted urchin): 129260167
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Entry
129260167 CDS
T09066
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129260167
09123 Folding, sorting and degradation
03018 RNA degradation
129260167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129260167
03041 Spliceosome [BR:
lpic03041
]
129260167
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129260167
mRNA degradation factors
5'-3' decay
Lsm complex
129260167
Spliceosome [BR:
lpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129260167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
129260167
NCBI-ProteinID:
XP_054754179
LinkDB
All DBs
Position
1:31451639..31458995
Genome browser
AA seq
93 aa
AA seq
DB search
MTTGTSNPSHLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVVEFETTS
EGRRVTKLDQILLNGNNITMLIPGSEGPEGSEV
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggtacttccaacccatctcaccttttacctcttgaacttgttgacaaatgt
attggctcccggattcacattgttatgaagacagacaaggagattgttggaactctgctt
ggctttgatgactttgtcaacatggtacttgaagatgttgtagaatttgaaacaacatca
gaaggtaggagagtcaccaaactggatcagattcttttgaatgggaataatattacaatg
cttatccctggaagcgaaggaccagaaggttcagaagtttga
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integrated database retrieval system
