Lytechinus pictus (painted urchin): 129260612
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Entry
129260612 CDS
T09066
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129260612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129260612
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
129260612
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA_2
Curto_V2
Motif
Other DBs
NCBI-GeneID:
129260612
NCBI-ProteinID:
XP_054754552
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All DBs
Position
1:complement(33897142..33917763)
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AA seq
730 aa
AA seq
DB search
MGSKEKEAIVIVLDVGHSMNQAPPGSCTTLETARDVITMILQRKVFSESKDEVALILFGT
PGSANKLDYDNITVERPFRLADLDLIQHIRSNIQPSQESGDFVDALIVAMDIIHDAISDK
SSKFTKNRIILFSDLGGEFADDKLQNVTDSLKAMKSEVNMIGLQFDSLDGGGGDGGDARD
QPSTSRGLGSRKQKTPQQRAGERLVLSIVEEVNGAIYSFDEVIPAVTMFEKRAVRPTPWK
VNLEVGPELKIPVSGYLKVKEATPKSWKSTFHKGAREFTPQTIRSQHLNDDEETEVEKDD
QVEGYRYGNDIIPISEEDKKNMDYKKPGKVMQVLGFTKDSRIKKHQQMGNSVYIFYAQPD
DQAASMSFSALVNALYETNSVAIVRRAYSASSNPRLGCLIPHIKANYEALFYIELPFAED
LRMYTFMSLDNNKKCQPSEEQLAAVDGLIDNMDLMTAEEDEDEKTEALKPKNTLNPYTQR
LCQCLMYRALNPEEPLPSIERAMDAFLQPCRAVAVQCEPQVERMKELFKLEKAKAKETVT
GDSIWKASNDGDGTEEPANKKARLDDAVNGDLSMAGMARGVITEVGTVDPVGDFKTIISQ
KDEDRFKEAAEQMGRRILQLVKESFGSQLYGKAMDCLRVYREQAIQLSEPESFNNYLRKL
KDELKELLKIDFWQDLTKDGLTLIDTTEASDSTVSKDEAEKFIQEEEVPMEEEPAAANEE
EDADDLLDML
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaaagaaaaggaagcgatagtgattgttctagatgttggtcattctatgaac
caagctcctcccggcagctgtaccacccttgagacagcacgggatgtcatcactatgata
ctccagaggaaggtgttttccgagtctaaagatgaggttgcccttatcctcttcggcact
ccagggtcagccaacaagctggactatgataacatcacagtggaaaggccattcagacta
gctgatcttgatcttattcaacacatcaggtctaatattcagccaagccaggaatcagga
gactttgttgatgctctaattgtggccatggatataatccatgatgctatttcagacaag
tcatcaaagttcacaaagaatcgcatcatcctcttctcagaccttggaggagagtttgct
gatgataagctgcagaacgtcacggacagcctcaaagccatgaaatcagaagttaacatg
attggacttcagtttgatagcttggacggtggtggcggcgatgggggtgatgcccgggat
caaccatctaccagccgaggtctagggtcaaggaagcagaaaaccccacaacagagggct
ggagagaggctggttctaagcatcgtagaagaagtgaacggtgccatctattcatttgat
gaggtgataccagctgtgacaatgtttgagaagagagctgtcagacctaccccatggaag
gtcaatctagaagtcggaccagaactcaaaattccagtctctggttatctcaaggtaaag
gaggcgacccccaaaagctggaagtccacattccacaaaggggcaagggagttcacccct
cagaccatccgctcccagcatcttaatgatgatgaagagacagaagtagaaaaggacgac
caagttgaaggttatcgctatggcaacgacatcatccccatctccgaagaggataagaaa
aacatggattacaagaaacctgggaaagtcatgcaagttcttgggttcaccaaagacagt
aggataaaaaagcatcaacaaatggggaacagcgtgtacatcttctatgcacaaccagat
gaccaggcagcttcgatgtctttctcagctctggtcaatgctctgtatgaaactaattca
gtagccatcgtaaggagagcgtactcggccagtagcaatccaaggctaggatgtttgata
ccccacatcaaagctaattatgaggctctgttctacattgaacttccatttgctgaagac
ctcaggatgtataccttcatgtccttggacaataacaagaaatgtcagccatcagaagag
caactggcagcggttgatggtctcatagacaacatggatttaatgacagcagaagaggat
gaagatgaaaagacggaagccctgaaacccaagaacaccttgaatccctacactcaaaga
ttatgtcagtgccttatgtatcgagcattgaacccagaggaacccttacccagtatagaa
cgagcgatggatgccttccttcaaccatgcagggctgtagccgttcaatgtgaaccgcag
gtcgaaaggatgaaggagctctttaagctggagaaagctaaagccaaggaaacagttaca
ggagacagcatatggaaagccagtaatgatggtgatggaacagaggaaccggccaataag
aaggcaaggttggatgatgcagtcaatggagatctcagtatggctggaatggcaagagga
gttatcacagaggttggtacagtcgatccagttggagatttcaagacgatcatctcgcag
aaggatgaggatagattcaaggaagctgctgaacagatgggaagaagaatcctacagctg
gtcaaagaatcgtttggttcacagctctacggcaaagccatggactgtcttagggtttac
agggaacaagcaattcagctgagtgaaccagaatcatttaataattatctcaggaagttg
aaagatgaactcaaagaacttttgaaaattgatttctggcaagatttgactaaagatgga
ctcacactgatcgatactacagaagcaagtgacagcactgtatcgaaagacgaagctgag
aagtttattcaggaggaggaagtcccaatggaagaagagccagctgcagccaacgaggaa
gaagatgccgatgatttgcttgatatgttgtaa
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