Lytechinus pictus (painted urchin): 129260653
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Entry
129260653 CDS
T09066
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03030
DNA replication
lpic03410
Base excision repair
lpic03420
Nucleotide excision repair
lpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129260653
03410 Base excision repair
129260653
03420 Nucleotide excision repair
129260653
03430 Mismatch repair
129260653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129260653
03036 Chromosome and associated proteins [BR:
lpic03036
]
129260653
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129260653
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129260653
DNA Replication Termination Factors
ELG1-RFC complex
129260653
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129260653
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129260653
Check point factors
HRAD17(Rad24)-RFC complex
129260653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_lid_RFC1
AAA_22
ATPgrasp_ST
Sigma54_activ_2
nSTAND1
Rep_fac_C
T4SS-DNA_transf
AAA_16
Sp-DndD
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
129260653
NCBI-ProteinID:
XP_054754582
LinkDB
All DBs
Position
5:8292134..8361262
Genome browser
AA seq
386 aa
AA seq
DB search
MDFRKAVKRVLARHGSQFEGLFQYHDENEDDGDEEETDDDDDFCLCLGNMFFVRKSDVKV
QSGDFPHLMVYGPSGAGKKTRIMCALRELYGSGVEKLRIEHQTFMTPSKSKIEITTIASN
YHIEVNPSDAGIYDRIVIQDLIKNTAQFQQMETSSQRDFKVVVLTEVDRLTKDAQHALRR
TMEKYTSTCRLILCCNSTSKVIPAIRSRCLGVRVAAPSVAEITQILQNVCKKEGLNLPSE
LGKKIAEKSERNLRKAILSCEACKVQQYPFSADQDIPEADWEIFLRETANHIIQQQSPRQ
LLEVRGRMYELLTHCIPPDVILKGLLRELLKNCDGQLKTEITHQAAFYEHRMQQGNKAIY
HLEAFVAKFMSIYKRYLEEGFEAMMF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggattttcggaaagccgtaaagagagtgttagccaggcatggttcacaattcgaaggt
ttattccagtatcatgatgagaatgaagatgatggtgacgaagaagagacggatgacgac
gacgacttttgcctttgtcttggcaacatgttctttgtacgcaagagtgatgtcaaggtg
caatcgggtgatttccctcacttgatggtttatgggccatcgggtgcagggaagaagact
aggattatgtgtgctctaagggagctgtatggatcaggagtagaaaaacttagaattgaa
catcaaactttcatgacaccatcaaagagcaaaattgaaatcactacaattgctagcaac
taccatattgaagtcaatccaagtgatgcagggatctatgaccgtattgtgattcaagat
ttgatcaagaatacagctcaatttcagcaaatggaaacatcttcacaaagagatttcaaa
gttgtggtgttaacagaagtggaccgtttaaccaaagatgcacagcatgcattgcgtagg
acaatggagaagtatacttccacatgtcgtcttattctctgttgtaactcaactagtaaa
gtcattccagctatccggagtagatgtcttggggtcagggtggcagcgccttctgttgct
gagatcacccagatcctccagaatgtgtgcaagaaagaaggattgaatctcccttcagag
cttggcaagaagattgctgaaaaatcagaaagaaatctcaggaaagccatcctatcatgt
gaagcatgcaaagtacaacagtatccattcagtgctgatcaggacatccctgaagccgac
tgggagatattcctaagagaaacggccaatcatatcatccaacagcagagtcctcgacag
ctactagaggtcagaggtcgtatgtatgaactcttgacccactgcatcccacctgatgtt
atcctcaagggacttctccgggagctcctgaagaattgtgatggtcaactgaagacggag
attacccatcaggccgctttctacgagcatcgtatgcagcagggtaacaaggctatctat
catcttgaagcattcgttgctaagttcatgagcatctataagaggtaccttgaagaagga
tttgaagccatgatgttctga
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integrated database retrieval system
