Lytechinus pictus (painted urchin): 129260826
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Entry
129260826 CDS
T09066
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129260826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129260826
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129260826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
SEO_N
Motif
Other DBs
NCBI-GeneID:
129260826
NCBI-ProteinID:
XP_054754783
LinkDB
All DBs
Position
5:5345150..5371298
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AA seq
633 aa
AA seq
DB search
MAGSGGFKFGSTGTSASGGSFSFGNTSASTKPTGLSFGTPASTSQAPTGVATGFKFGGAA
SQASGGLQLGGATATSQASKPLGFGLGSTATTSAAGTGLTLGTPSTGTGLSLGGTLGGTL
GGTNTGTGLTLGGAKPGGLTLGGSKPAGSGFSLGGTSGTGLTLGGTTGLGLGGTATTSSG
LTLGSVSTSGVSTGLALGVVAPTAKVGLGGVDPSTLSTSTATSTSSTASDSTGKGQGVKE
SDVPQPICQNVKNFKEYVKKQKSTREEILRFSDKPLHRVREETAALHQLLRQASSSLQRN
AAAVRKLKEQSAQQLKDVEIAQRTREIPAALQLEYSAPTEYFQRLVYQFEQDMVLCRQQI
EQMESFMAALEQPASYSPQELSNIMVKLNETFVALAAQLQGVHEIIKAQKDQYLNYRRVY
LGDSQDVFSARRKLAERQTRSKTQSKGPQPFTQFPNMALVMATAMQSAQKPTGMGGGLQT
GLGTTTGLGGTTAGLGGTAVGLGGTTTGLGGAGSTFGGTTGFGTGFQNKGFGTGTGTFGT
GSTLGTGLGSTSSTFGGGTGGLFGSNPATTTSATGFNFGGSLSAGPTLGSTGAAGGGFGG
FGTTPAGASFGSTTTGKPLQLQKPPLKTRKNTR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtagcggcggctttaaatttggatcaacaggaaccagtgccagtggaggtagc
ttttcatttggaaatactagtgcaagtaccaaacctactgggctctcatttggcactcct
gcatctacctctcaagctccaactggagtagcaacagggttcaagtttggaggagcagca
tcccaagcatcaggtggactacaactaggaggtgcaacagctacatctcaagcaagtaaa
cctcttggttttggactgggttccacagctactacttctgctgcaggtactggtctaact
ttaggaacaccaagtactggtacaggtctatctctcggtggtacccttggaggtacccta
ggaggtaccaacactggcactggtctgaccttgggtggcgcaaagcctggtgggttgacc
cttggtggatctaaaccagctggaagtggattcagtctaggaggaacctcggggaccgga
ctcactctgggaggtacaacaggtcttggcctgggagggaccgctaccacatcttctggg
ctaacgcttggttctgtttctaccagtggagtgtcaaccggccttgcactaggtgttgtt
gcacctacagctaaggttggcctgggtggtgtggacccatcaactctttctacttccact
gctacgtcaacctcaagtactgcgtcagattcaactggcaaaggacaaggtgtcaaggag
agtgatgtgcctcaaccaatatgtcagaatgtgaagaatttcaaagagtatgttaaaaag
caaaaatccacacgcgaggagattttacgtttctctgacaagcccctccatcgagtgcgt
gaagagacagcagcccttcatcagctcctccggcaagcctccagcagcctccaaaggaat
gctgcagctgtccgtaagctgaaggaacagtctgctcaacagctgaaggatgtagagata
gcacagaggactagggagataccagctgctctacagcttgaatactctgcacctacagag
tatttccagagacttgtttatcagtttgagcaagatatggtgttatgtagacaacagatt
gaacagatggagagtttcatggctgccttggagcaacctgcttcatattcacctcaggag
ctatccaatatcatggtgaaactcaacgagacctttgttgctttggctgcccagctgcaa
ggtgttcatgaaatcattaaggcccagaaggaccagtacttgaactaccgtcgggtatat
ctaggagactcgcaggatgtcttctcagcccgtcgtaagctagctgagagacagaccaga
tccaagacccagtccaagggtcctcaacccttcacacagtttcctaatatggctctggtt
atggcaaccgctatgcaatctgctcaaaaaccaactggtatgggaggtggcttgcaaact
ggtcttggtaccaccacaggcttgggaggcactactgcaggattgggtggtactgctgtt
ggattaggtggtaccacaacaggattgggcggtgcaggttcaacctttggaggcacaact
ggctttggcactggcttccagaacaaaggctttggaactggcactggaacctttggaaca
ggctcaacactaggaacaggcctgggttcgacctcatcaacctttggtggtggaacaggt
ggtctctttggtagcaacccagcaactacaacttcagcaactggttttaactttggaggt
agtctaagtgcaggtcccactctaggctctactggtgcagcaggtggtggatttggtggc
tttgggactacaccagcaggtgcctcatttggatcaaccacaacaggaaagcctttacaa
cttcaaaaaccccctcttaagacgcggaagaacacacgctga
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