Lytechinus pictus (painted urchin): 129260915
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Entry
129260915 CDS
T09066
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129260915
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpic01007
]
129260915
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129260915
Enzymes [BR:
lpic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
129260915
Amino acid related enzymes [BR:
lpic01007
]
Aminoacyl-tRNA synthetase
Class I (G)
129260915
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129260915
Prokaryotic type
129260915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
129260915
NCBI-ProteinID:
XP_054754895
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Position
5:10208500..10231145
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AA seq
612 aa
AA seq
DB search
MGLRIASELFGRHGIICSLGLTSGYRSRRSLYLRRDVCFPSSATMATCHSQFSQARYPVE
RDGKNTTSTIHVLNSLTAAQERKSAKKEPLLLMNKNVATWYACGPTVYDSAHIGHASSYV
RFDIIRRILAEFFQTSVVMVMGITDIDDKIIKRSQEQKIEDFRELARFYEREFYQDMQYL
NVLPATVYTRVSDHIPDIIAFIGKIITNGFGYTTSNGSVYFNVDAFTVERYNKLASQDLD
VQHDDGKETIDPEKRHPRDFALWKGVKPGEPWWEAPWGKGRPGWHIECSAMSHAIFGERL
DIHTGGRDLSFPHHNNEIAQCEACFNSGQWANYFLHSGHLYRKHDVDKMSKSLQNVVSIQ
EFLKTYTSNQFRFLCLMSKYDHDLEYGPGTMQQAVVLHRQMSAFLNDADAYVKGQICCRP
FNEAELMQRLENTQDEVIGALADDFDTKRALDCIMKLAHTCNSNFSQVSEETSSRSPGAV
AAVATYINQVLSNLGLQMSTRSGTHSDHSSQAMNTALDTLVNFRQDVRRWALTDQEDHGI
SSVIQSSNGDSEEMRLRRKKLMKERAPLLNACDHVRDMLAQNGIQIKDRGASATWEFVEK
TKQVKTEDGTDR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagaattgcaagtgaattattcggccgacatggcataatttgcagtttaggt
ctaacttctggatatcggagccggaggagtctgtatttgagaagagatgtctgcttccca
tcatctgctaccatggctacctgccattcccaattctctcaagccaggtatccagtggag
agagatggaaagaacactactagtactatccatgtcttgaactcattaacagcagcacaa
gaacggaaaagtgcaaagaaagagcctctgctactgatgaacaaaaatgttgcaacatgg
tatgcttgtggtcctactgtttatgattctgcccatattgggcatgcaagctcttatgtc
agatttgatatcatccgtcgcatcttagcagagttcttccagacgagcgttgtcatggtg
atgggtatcactgacatcgatgataagatcataaaacgttcacaggagcagaagatagag
gacttcagagaattagctagattttatgaaagagaattctatcaagatatgcaatacctc
aatgtcttaccagcgactgtgtacacccgagtatcagatcatataccagacataattgct
ttcattggtaaaatcatcacaaatggctttggatatacaacaagtaatggtagtgtgtac
ttcaacgtggatgcgttcaccgtagagagatacaacaagcttgccagtcaagacttggat
gttcagcatgatgatggtaaagagacgattgatcctgagaagagacacccaagagacttt
gctctgtggaaaggagtcaagcctggagaaccatggtgggaagcaccatggggaaaagga
aggccaggatggcatattgaatgttctgctatgtcacatgccatctttggtgagcggtta
gacattcatactggcgggcgagatctatctttccctcatcacaacaatgagatagcacaa
tgtgaggcttgcttcaactctggtcagtgggctaactacttcttacattcaggtcattta
tacaggaaacatgatgttgataagatgtccaagtcccttcagaatgttgtgagcatccaa
gagttcttgaagacttatacctcaaaccagttcagattcctgtgtctaatgtccaaatat
gatcatgatttagagtatggacccggtacaatgcagcaagctgtagtacttcatagacaa
atgtcagctttcctcaatgatgctgatgcctatgtcaaaggtcaaatatgctgtagacca
ttcaatgaagctgaactcatgcaaaggttggagaatactcaagatgaagtgattggggca
ttagctgatgattttgatacaaagagggcactagactgtattatgaaactggcccataca
tgcaactcaaatttcagtcaagtatcggaggagacgtcaagtcgtagcccaggggcggtt
gcagctgtagctacatatatcaaccaagtcttatctaacttaggattacaaatgtctaca
agatcaggtactcattctgatcattcatcccaagcaatgaacactgctctagacactctt
gtcaactttagacaggatgtccgtcgatgggccctcactgaccaagaggatcatgggata
tcaagtgtaattcaaagcagcaatggagattctgaggaaatgaggctgaggagaaagaaa
ctgatgaaagagagggctccactgctcaacgcatgcgatcatgttagagatatgctagct
cagaatggtatacagattaaggatcggggagcatcagccacatgggaatttgtagagaaa
acaaaacaagtgaaaacagaggatggaacagacaggtga
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