Lytechinus pictus (painted urchin): 129260941
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Entry
129260941 CDS
T09066
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129260941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129260941
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129260941
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129260941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
129260941
NCBI-ProteinID:
XP_054754926
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All DBs
Position
5:12691465..12705224
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AA seq
284 aa
AA seq
DB search
MPTQTNEPHIVDVWNTNLEDVFRKIRIIIQKYKYVAMDTEFPGVVARPLGEFRTNSEYQY
QLHRCNVDLLKIIQLGITFCDEQGNFPKTGSTFQFNFRFNLSEDMYAKDSIELLSGSGIQ
FKKHEDEGIEVDHFAELLMTSGVVLNDSVKWVTFHSSYDFAYLVKLMTATNLPSEESEFF
ELLRIFFPCIYDVKYLMKSCKDLKGGLQEVADILQIQRIGPQHQAGSDSLLTVQTFLKMR
ECYFEDNIDDDKYCGHLYGLGSAYMQNGSAYTEENNTAPTTTAT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcagactaatgaacctcatattgttgacgtttggaacacaaatttagaggat
gtgttcaggaagattcgcatcatcatacagaaatacaaatatgtggccatggatacagag
tttcctggcgttgtcgcccggccactgggtgagttccgcaccaactccgaatatcagtac
cagctgcatcgatgcaacgtagacttgctcaagataatacagctaggcattactttctgt
gatgaacagggtaattttcccaagacgggctcaacgttccagttcaacttcaggtttaat
ctcagtgaggacatgtacgctaaagattcaatagagctcttatctgggtcaggtatccag
ttcaagaagcatgaagatgaaggaatcgaggttgatcactttgcagagcttctcatgaca
tcgggagtggttctcaacgacagtgtcaagtgggtcaccttccacagtagttacgacttt
gcctacctggtcaagctgatgacggcgaccaacctgccttcagaggagtcagaattcttt
gagctcctgaggatcttcttcccatgtatttatgatgtgaaatatctgatgaagagctgt
aaagacctcaaggggggtcttcaagaagtagctgatatccttcagatccagaggatagga
cctcaacatcaagctggcagtgatagcctcctcactgtacaaacattccttaaaatgaga
gagtgctattttgaagataacattgatgatgacaagtattgcggtcacctgtatggtctg
ggatcggcttacatgcagaacggatcggcttacacggaagagaacaacacagctcctacg
actacagctacgtaa
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