Lytechinus pictus (painted urchin): 129261209
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Entry
129261209 CDS
T09066
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129261209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129261209
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129261209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Methyltransf_25
FUT8_N_cat
KxDL
Motif
Other DBs
NCBI-GeneID:
129261209
NCBI-ProteinID:
XP_054755244
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Position
5:complement(19980195..20020226)
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AA seq
568 aa
AA seq
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MHSGIDTEAAPTASGMLGLIFGRVTVSGQILAVYDSKKLGFSFGSTTKTTAPTLGFGTST
APTTSSSAFGFGIKPIGTATTSTGGGFGFGSGGLGGNTQTTSSASGFNFGTSTSTGGFGA
KPGGSSLFGGGGFGQTATSSSSLKFGFGGLNTGTTTTSGLGTGFGAQPQQQQQQQQQLHV
GVDNNLVLLAAALSVPSIYGDERDNLLAKWNQLQAFWGTGSGFVNQNTTVNFTPENPFCR
FKTVGYSVKPTAKTKDGLVVLHFKKKDTEIRAQQQQLVDSLYRIMGSKPTLSVCVEDVRP
LLDDKAEVVIYILERLPTGATKRIPSTETFAFLNNAKIKQQLGSLGVVHMQPRQALTQTQ
LENYLQNPPLGYDPRLWRQAQLDNPDPDRLIPVPLVGFDVIKTRLEYQQQETQQHQARLD
LVSKDLEKLQEQQDTLQARIAENKRRHLELSHRVLQVMARQEVQRKQGVSIQLEEEHLRT
QLEGLMAELNAPTQMKARLNEMLSQIRLQSHLPFSRNSEQYSIDSDLQYEIRQHLKQQQE
GISHLVGIIKEDLEDLKLIERGLEEATS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgggatcgacacagaagctgcccctacggcgtcgggcatgttgggcctcatt
tttggtcgggtgactgtgtccggtcaaattcttgcagtctatgacagtaaaaaacttgga
ttttcctttggtagtacaactaaaacaactgctcctactcttggctttgggacttctacg
gcccccaccaccagcagctctgcatttgggtttgggattaaacccataggaacagctaca
accagtactggtggaggctttggctttgggagtggtgggcttggtggaaatactcagaca
actagcagtgcatcgggattcaactttggaacatctacaagcacaggagggttcggtgcc
aagccaggaggatcttctctctttggtgggggtggctttggtcaaactgctacctctagc
tctagcctcaagtttggttttggtggtcttaacacaggaacaacaactacaagtggatta
ggtactggatttggtgctcagcctcagcagcagcagcagcaacaacaacaactacatgta
ggtgttgacaacaaccttgttctgcttgctgctgctctatctgtacccagtatctatgga
gatgaaagggataatctactagccaaatggaatcaacttcaggcattctgggggaccggt
agtgggtttgtcaatcagaataccacagtcaacttcactccagaaaaccccttctgtaga
ttcaagacggttggctacagcgtcaagccgacagcaaagacaaaagatggtctggttgtc
ttacacttcaagaagaaagacactgaaattagggctcagcaacaacagctggttgattca
ctctacaggatcatgggcagtaaaccaactctgtctgtatgcgtggaggatgtcagaccc
cttctggatgataaagcggaggtagtaatctacatcttggaacgtcttcctactggtgct
accaaacgcatcccatcaacagaaacatttgccttcttgaacaacgctaagatcaagcaa
cagcttggtagtttgggggtagttcacatgcaaccaagacaagcgttgacacagactcag
ttagagaactacctccagaatcctcctctaggttatgacccaagactatggaggcaagcc
cagcttgataatcctgatcctgatagactgatcccagtcccacttgttggatttgatgta
atcaagacaagattagaatatcagcagcaagagacacaacagcatcaagcaagactggat
cttgtaagcaaagacttggaaaaattgcaagagcagcaggacacattgcaggcgaggata
gcagagaataagagaagacatctagaattatcacatagagttttacaggtcatggctcga
caggaggtccagagaaaacaaggagtgtccattcagttagaggaggagcatcttagaaca
cagcttgagggactgatggcagagttaaatgctccaactcagatgaaggctcgtctgaat
gagatgttatcccagatccgtttacagagtcaccttccattcagtcgtaatagtgagcag
tattctatcgattctgatctccagtatgaaattagacagcatctgaaacagcaacaagaa
ggtatcagccatcttgtgggtatcatcaaagaagacttggaagatttaaaactcattgag
agagggttagaagaggcaaccagttga
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