Lytechinus pictus (painted urchin): 129261463
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Entry
129261463 CDS
T09066
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
KO
K13111
WD40 repeat-containing protein SMU1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129261463
Spliceosome [BR:
lpic03041
]
Complex B
Other components
Complex B specific factors
129261463
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR90_beta-prop_4th
Mala_s_1-like
Beta-prop_EIPR1
Beta-prop_NWD2_C
Beta-prop_BBS7
Ge1_WD40
Beta-prop_Vps41
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
129261463
NCBI-ProteinID:
XP_054755498
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Position
5:complement(48209656..48228442)
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AA seq
360 aa
AA seq
DB search
MSPDSRFMSAPAAVLSTVRFKQSPALSRWAFIETLFSYTVTPFPCRCFQHTAFKPTCQQA
LDDRRLDVASLQVASTRPEHYGFLPSCSLSLQTAATRQPGLSTASHQPPALFFEIAGPFT
RTGVFMICTGAADVWVSPSKSASPRMSLVRVRASTDTPSSSDRRCSEGDSDISTITAQRI
HGLKSGKTLKEFRGHTSFVNEAIFAPDGHLAISASSDGTIKVWNIKTTECINTFKSLGGS
SVTDITVNSVLPYPKNAEQFVVCNRSNTVAIMNMQGQIVRSFSSGKREGGDFTCSCLSPR
GEWIYCIGEDLVLYCFSTSTGKLERTLTVHEKDVIGIVPHPHSNLLATYSEDGLLKLWKS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagactcccgcttcatgtcagctccagccgccgtgctaagcaccgtgcggttc
aagcagtcacctgccctctcacgctgggcttttattgaaacgctgttcagctacacggtg
accccttttccatgcaggtgcttccaacatacggctttcaagccaacatgtcagcaagct
ctcgatgaccgacggctggacgttgcatccttacaggttgcatcaacacgtcccgagcat
tacgggttcttaccctcgtgttctctgtcattacagaccgctgctacgcgacagccgggc
ttatcaacagcctcgcaccagccaccggcccttttctttgaaattgccggccctttcacc
cgcacgggtgttttcatgatatgcacaggtgctgctgacgtatgggtctcacccagcaag
tcggcaagcccccgtatgtcgctggttagagtcagggctagtacagacaccccgtcctcc
agcgatcgccgctgtagtgagggcgactccgatattagcaccatcaccgctcagcggata
catgggttgaaatcaggcaaaacattgaaggaattccgtggtcacacatcatttgtcaat
gaagccatctttgctcctgatggtcatcttgctatcagtgcttcttcagatggtaccatt
aaggtttggaacatcaagactacagagtgtatcaataccttcaagtcacttggaggttca
tcagttactgatatcacagttaattcagtcctgccatatcccaagaatgctgaacaattt
gttgtttgtaaccgtagcaacactgttgcaatcatgaacatgcaaggacagattgttagg
agttttagttctggtaagcgtgagggtggagattttacatgcagctgtctttcaccaaga
ggagaatggatctactgcataggggaggatctggttctgtactgcttctcaacatcaaca
ggaaaactagaaaggacactgactgttcatgaaaaggatgtgataggtattgtgccccac
cctcatagcaatcttctagccacatacagtgaagatggactcctcaaactatggaagtca
tga
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