Lytechinus pictus (painted urchin): 129261785
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Entry
129261785 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129261785
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129261785
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Helicases
129261785
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_integrase
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129261785
NCBI-ProteinID:
XP_054755797
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All DBs
Position
5:76550253..76562917
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AA seq
396 aa
AA seq
DB search
MADFEVEKGKRLSFAGLGLHDWLVRQCEAVGIKQPTPIQHNCIPAILRGSDCIGCAKTGS
GKTAAFALPILQKLSEDPYGVFGLVVTPTRELGIQIAEQFRVLGKPIGLRVAVVIGGIDM
VEQGLELSKKPHIVIATPGRLADHIKSTTTFDLHAIKFLVLDEADRLLEGNFGPDLEVIF
DFLPAKRQTLLFSATITDTMKELQKMSMNKPYFWHSSFXILATVEQLDQRYVLMPAQVKD
AYLMYIISEFTEKNKDHSVIIFTSTCKYCHVLSIMLRNLGMGIATLHSLVKQKTRIASLA
MFKSNHVRILVATDLASRGLDIPMVQMVINHNVPTSPKDYIHRVGRTARAGRGGMSITMV
TQFDVKLVQAIEKTISEYRVSQLFFCRIEYGLWNKK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgaagtggaaaaggggaaaaggttatcctttgcaggactaggacttcat
gactggcttgtcagacagtgtgaagcagtcgggatcaaacaaccaacacccattcaacac
aactgcattccagcaattttgagaggtagtgattgcattggctgtgccaagacagggagc
ggtaagacagctgcttttgccttgcccatccttcagaaactgagtgaagacccttatgga
gtctttggacttgttgtaaccccaacaagggaactgggaattcagatcgcagaacagttc
agagtgttaggaaagccaataggattgagagtagcagtcgtcattggcggaatagatatg
gtcgagcagggactggagctgtctaagaaacctcacattgtcatagcaacccctggtcgt
ctagctgatcacattaagagtacaacaacctttgacctccatgccatcaagtttctggtc
ttggatgaagcagatcgcttattggaggggaactttggcccagatttagaggtcatcttt
gatttcttgccagctaaaagacagacattgcttttcagtgccactatcacagataccatg
aaggagctacagaagatgtccatgaataaaccttacttctggcattccagcttttaaata
ctggctactgttgagcagctagaccaacgctatgtgctgatgcccgctcaggtcaaagat
gcgtatctcatgtatatcatttcagaattcactgaaaagaacaaagatcattcggttatc
atcttcacaagtacatgcaaatattgccatgtgctatcgataatgctgaggaaccttggt
atgggtattgctactctacattcacttgttaagcagaaaactaggatagcgtcattggct
atgttcaagtccaatcatgtgaggatcctggttgcgactgatctggccagtagagggctt
gatatccccatggttcagatggtcatcaatcataacgtacctacgtctcctaaagactac
atccacagggtcggcaggactgcaagagcaggtcgtggaggtatgtctattaccatggta
acacaatttgatgtcaagctcgtccaagcaatagaaaagaccatcagtgagtacagagtc
agtcaattattcttttgtagaatagaatatggtttatggaacaaaaaataa
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