Lytechinus pictus (painted urchin): 129261873
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Entry
129261873 CDS
T09066
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04145
Phagosome
lpic04512
ECM-receptor interaction
lpic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129261873
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129261873
09142 Cell motility
04820 Cytoskeleton in muscle cells
129261873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129261873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpic04147
]
129261873
00536 Glycosaminoglycan binding proteins [BR:
lpic00536
]
129261873
Membrane trafficking [BR:
lpic04131
]
Endocytosis
Phagocytosis
Opsonins
129261873
Exosome [BR:
lpic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129261873
Exosomal proteins of colorectal cancer cells
129261873
Exosomal proteins of bladder cancer cells
129261873
Glycosaminoglycan binding proteins [BR:
lpic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129261873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
COMP
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
129261873
NCBI-ProteinID:
XP_054755878
LinkDB
All DBs
Position
5:complement(83557897..83587072)
Genome browser
AA seq
995 aa
AA seq
DB search
MDILLCATRKSYARDLLPVAKKAKSDGEFQARFQEADLFDGFSIYSSRIPGISPAPQENS
NIYGDAFFFNGMGIRYPIIANEEFFKKFAKEMRKNEDVYFVIRSRLAPRQHGVFFGVYSS
NYYSPDSFRSPLRFELSYNGTNGGKLVLKYRIGDQQRQAEFANLPIVDGDWHTILLQFHS
ERSGTTLTLYVDCRLAKQMDIDDRLSRVFSRTVIDGSEMRLGQAGYGMTANPLKGTIQNA
KFVYGGPIIDVLHLLSCSLSTEPKPLDVDGWPGATVLMDAFQSLSNTLMVLKNGMDEQTR
EIQHLRHTLENCRMCERTDYFTSGPQTIIRHGCSSNPCFPDVMCFDEPDGLGYRCGPCPA
GYRGNGTHCYDINECLEAYPCSDVVDCINLMPGFRCPPCPEGFIGLGLEGIGLEAAVRNR
QLCDDINECERNNGDCVPNSYCLNTRGSHICGDCMHGFEGNQTVGCKERNTCPNGTPSPC
HPKAECIIHRNNAYTCECIIGWAGDGYDCAIDTDLDGFPDNELPCADKHCRADNCVHIPN
SGQENQDGDEMGDLCDPDADNDGVRNGPDNCPLVANPDQLNVNDDDEVGERCDNCPMTPN
PKQIDTDKDGRGDECDDDKDDDGILNIHDNCELVPNRLQEDTDGDGHGDACDNCPMHYNP
DQNNTDSDLLGDICDNNEDADDDGIQDNLDNCPKIPNNPQLDSDGDGIGDACDDDDDNDG
VYDIVDNCRIVPNPDQADFNQDGIGDRCDSDFDRDGVDDPYDACPENPNIFSTDLRTYQT
VVLDPEGEAQVDPKWIVFDEGRQIMQTINSDPGLAISYQAFDGVDFEGTFYVNTRTDDDF
AGFVFGYQDSASFYVLMWKQGPQTYWEAAPFRAVGEPGFQLKVIKSDTGPGEMMRNALWH
TGDTPGQARLLWKDPNNHGWKDHVAYRWRVIHRPSIGLIRVKLYEADTLVADSGFLRDTT
MRGGRIGLFCFSQEDIIWARITYKCNDNIPEGVVF
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatatactattgtgtgccacccggaagtcatatgcaagggacctgcttcccgttgcc
aaaaaagcgaagagtgatggcgagtttcaggccaggttccaagaagcagatcttttcgac
ggcttcagtatctacagttctcgcatccccggcatctcaccggcacctcaggagaactcc
aacatctacggcgatgcgttcttcttcaacggcatgggcatccgttaccccatcatagcc
aacgaggaattcttcaagaagttcgccaaggagatgcggaagaacgaggatgtgtacttc
gtaatacgatcacgacttgctcctcggcagcatggcgtattctttggagtgtactccagt
aattactactcacccgatagcttcagatccccactcaggttcgagctctcctacaacgga
acaaatggaggaaaattggtactcaaataccgaataggagaccagcagcgccaggcggag
ttcgccaacctcccgatcgtcgacggcgactggcataccatcctcctccagttccactcc
gaacgatccggtacgaccctcacactctatgtcgactgcaggctcgctaaacagatggac
atcgatgacaggttgtcacgggtcttttcccggacggttatcgacggttcggagatgaga
ctgggccaggccggttacggcatgactgcaaacccgttgaagggtacgatccagaatgct
aaatttgtatatggcggtccgatcatcgacgtacttcatttgctgtcgtgcagtctctca
acggagccaaagccattggatgtcgatggatggcctggtgcgacggttttgatggatgct
ttccaatccttatctaatacacttatggtcttgaaaaatggcatggatgagcaaacccgt
gaaattcaacatcttagacacaccttagaaaactgcaggatgtgtgagcgaaccgattat
tttacctcaggtcctcagacaatcatccgacatggctgtagctccaacccctgcttcccc
gatgtcatgtgcttcgatgagcctgatggtctggggtatcggtgtggtccttgccctgca
ggatatcgtggaaacggcacccattgctacgatatcaatgagtgtcttgaagcttacccg
tgttcagacgtcgtggattgtatcaacctaatgcccggcttccggtgcccaccatgtccc
gaaggcttcattggtcttggtttagagggaatcggtcttgaagccgctgtaaggaaccga
cagctttgcgatgatattaacgaatgcgaaagaaataacggtgactgtgtgccaaactcg
tactgtctcaatacaaggggttcgcatatttgcggtgactgtatgcatggatttgaggga
aatcagacggttggctgcaaagagagaaatacatgtccgaacggtacccctagtccatgc
catccaaaggccgagtgcatcatacatcggaataacgcttacacatgcgagtgtattatt
ggctgggctggtgacggctacgattgtgctatcgataccgatctggacggctttcccgat
aacgaactcccgtgtgccgacaagcattgcagagctgataactgcgtgcatatcccgaac
agcgggcaagaaaatcaagatggcgacgaaatgggtgacttgtgtgacccggatgcagac
aacgatggagttcgcaatggtccagacaactgccctctcgtggcgaaccccgaccagctg
aatgtgaacgatgatgatgaggtaggcgagcgatgtgataactgcccgatgacgccgaac
cccaagcagattgataccgataaagacggaaggggcgacgaatgcgacgatgacaaagac
gatgacggaatactgaatatccatgataactgcgagcttgtcccgaacaggcttcaagaa
gatactgacggggacggtcatggcgatgcgtgtgataactgtccgatgcattacaatcca
gatcagaataacacggattctgatcttcttggagacatatgcgataacaacgaggatgcg
gatgacgatggtattcaagacaatttagacaactgccctaagattccgaataatccccaa
ttggactctgacggtgatggcattggtgatgcgtgcgacgacgatgatgacaacgacggc
gtttacgacatcgtagacaactgcagaatagttcccaacccggatcaggcagatttcaat
caggatggtattggtgaccgatgcgacagtgattttgatcgcgacggcgtggatgatccc
tacgatgcttgcccagagaaccccaacatcttcagcaccgatctccgaacctaccagaca
gtcgtcctagatcctgaaggcgaggcccaagtcgaccccaagtggatcgtctttgacgag
ggtcgtcagatcatgcagaccatcaacagcgatccgggactcgccatttcctaccaggcc
tttgacggggtggacttcgaagggaccttctacgtcaacacccgaacggatgatgacttc
gcaggctttgtcttcggataccaggactcggctagcttctacgttctgatgtggaagcaa
ggtccgcagacctactgggaggccgcccccttcagggccgttggtgaaccgggtttccag
ctgaaggttatcaagtcggatactggcccaggcgagatgatgagaaacgctctatggcat
acaggagatacgccgggacaggcacgtcttctttggaaggatccaaataaccatggttgg
aaggatcacgtggcctacaggtggagggtcatacacagaccttccataggactcattaga
gtaaagttgtacgaagcagacacgttggtggctgactccgggttcctccgggacacgacg
atgagaggaggaaggattggtttgttctgcttctcacaagaagatatcatctgggccaga
ataacctacaaatgtaacgataatataccggagggcgtggtcttctga
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