Lytechinus pictus (painted urchin): 129261873
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Entry
129261873 CDS
T09066
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04145
Phagosome
lpic04512
ECM-receptor interaction
lpic04518
Integrin signaling
lpic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129261873
04518 Integrin signaling
129261873
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129261873
09142 Cell motility
04820 Cytoskeleton in muscle cells
129261873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129261873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpic04147
]
129261873
00536 Glycosaminoglycan binding proteins [BR:
lpic00536
]
129261873
Membrane trafficking [BR:
lpic04131
]
Endocytosis
Phagocytosis
Opsonins
129261873
Exosome [BR:
lpic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129261873
Exosomal proteins of colorectal cancer cells
129261873
Exosomal proteins of bladder cancer cells
129261873
Glycosaminoglycan binding proteins [BR:
lpic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129261873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
COMP
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
129261873
NCBI-ProteinID:
XP_054755878
LinkDB
All DBs
Position
5:complement(83557897..83587072)
Genome browser
AA seq
995 aa
AA seq
DB search
MDILLCATRKSYARDLLPVAKKAKSDGEFQARFQEADLFDGFSIYSSRIPGISPAPQENS
NIYGDAFFFNGMGIRYPIIANEEFFKKFAKEMRKNEDVYFVIRSRLAPRQHGVFFGVYSS
NYYSPDSFRSPLRFELSYNGTNGGKLVLKYRIGDQQRQAEFANLPIVDGDWHTILLQFHS
ERSGTTLTLYVDCRLAKQMDIDDRLSRVFSRTVIDGSEMRLGQAGYGMTANPLKGTIQNA
KFVYGGPIIDVLHLLSCSLSTEPKPLDVDGWPGATVLMDAFQSLSNTLMVLKNGMDEQTR
EIQHLRHTLENCRMCERTDYFTSGPQTIIRHGCSSNPCFPDVMCFDEPDGLGYRCGPCPA
GYRGNGTHCYDINECLEAYPCSDVVDCINLMPGFRCPPCPEGFIGLGLEGIGLEAAVRNR
QLCDDINECERNNGDCVPNSYCLNTRGSHICGDCMHGFEGNQTVGCKERNTCPNGTPSPC
HPKAECIIHRNNAYTCECIIGWAGDGYDCAIDTDLDGFPDNELPCADKHCRADNCVHIPN
SGQENQDGDEMGDLCDPDADNDGVRNGPDNCPLVANPDQLNVNDDDEVGERCDNCPMTPN
PKQIDTDKDGRGDECDDDKDDDGILNIHDNCELVPNRLQEDTDGDGHGDACDNCPMHYNP
DQNNTDSDLLGDICDNNEDADDDGIQDNLDNCPKIPNNPQLDSDGDGIGDACDDDDDNDG
VYDIVDNCRIVPNPDQADFNQDGIGDRCDSDFDRDGVDDPYDACPENPNIFSTDLRTYQT
VVLDPEGEAQVDPKWIVFDEGRQIMQTINSDPGLAISYQAFDGVDFEGTFYVNTRTDDDF
AGFVFGYQDSASFYVLMWKQGPQTYWEAAPFRAVGEPGFQLKVIKSDTGPGEMMRNALWH
TGDTPGQARLLWKDPNNHGWKDHVAYRWRVIHRPSIGLIRVKLYEADTLVADSGFLRDTT
MRGGRIGLFCFSQEDIIWARITYKCNDNIPEGVVF
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatatactattgtgtgccacccggaagtcatatgcaagggacctgcttcccgttgcc
aaaaaagcgaagagtgatggcgagtttcaggccaggttccaagaagcagatcttttcgac
ggcttcagtatctacagttctcgcatccccggcatctcaccggcacctcaggagaactcc
aacatctacggcgatgcgttcttcttcaacggcatgggcatccgttaccccatcatagcc
aacgaggaattcttcaagaagttcgccaaggagatgcggaagaacgaggatgtgtacttc
gtaatacgatcacgacttgctcctcggcagcatggcgtattctttggagtgtactccagt
aattactactcacccgatagcttcagatccccactcaggttcgagctctcctacaacgga
acaaatggaggaaaattggtactcaaataccgaataggagaccagcagcgccaggcggag
ttcgccaacctcccgatcgtcgacggcgactggcataccatcctcctccagttccactcc
gaacgatccggtacgaccctcacactctatgtcgactgcaggctcgctaaacagatggac
atcgatgacaggttgtcacgggtcttttcccggacggttatcgacggttcggagatgaga
ctgggccaggccggttacggcatgactgcaaacccgttgaagggtacgatccagaatgct
aaatttgtatatggcggtccgatcatcgacgtacttcatttgctgtcgtgcagtctctca
acggagccaaagccattggatgtcgatggatggcctggtgcgacggttttgatggatgct
ttccaatccttatctaatacacttatggtcttgaaaaatggcatggatgagcaaacccgt
gaaattcaacatcttagacacaccttagaaaactgcaggatgtgtgagcgaaccgattat
tttacctcaggtcctcagacaatcatccgacatggctgtagctccaacccctgcttcccc
gatgtcatgtgcttcgatgagcctgatggtctggggtatcggtgtggtccttgccctgca
ggatatcgtggaaacggcacccattgctacgatatcaatgagtgtcttgaagcttacccg
tgttcagacgtcgtggattgtatcaacctaatgcccggcttccggtgcccaccatgtccc
gaaggcttcattggtcttggtttagagggaatcggtcttgaagccgctgtaaggaaccga
cagctttgcgatgatattaacgaatgcgaaagaaataacggtgactgtgtgccaaactcg
tactgtctcaatacaaggggttcgcatatttgcggtgactgtatgcatggatttgaggga
aatcagacggttggctgcaaagagagaaatacatgtccgaacggtacccctagtccatgc
catccaaaggccgagtgcatcatacatcggaataacgcttacacatgcgagtgtattatt
ggctgggctggtgacggctacgattgtgctatcgataccgatctggacggctttcccgat
aacgaactcccgtgtgccgacaagcattgcagagctgataactgcgtgcatatcccgaac
agcgggcaagaaaatcaagatggcgacgaaatgggtgacttgtgtgacccggatgcagac
aacgatggagttcgcaatggtccagacaactgccctctcgtggcgaaccccgaccagctg
aatgtgaacgatgatgatgaggtaggcgagcgatgtgataactgcccgatgacgccgaac
cccaagcagattgataccgataaagacggaaggggcgacgaatgcgacgatgacaaagac
gatgacggaatactgaatatccatgataactgcgagcttgtcccgaacaggcttcaagaa
gatactgacggggacggtcatggcgatgcgtgtgataactgtccgatgcattacaatcca
gatcagaataacacggattctgatcttcttggagacatatgcgataacaacgaggatgcg
gatgacgatggtattcaagacaatttagacaactgccctaagattccgaataatccccaa
ttggactctgacggtgatggcattggtgatgcgtgcgacgacgatgatgacaacgacggc
gtttacgacatcgtagacaactgcagaatagttcccaacccggatcaggcagatttcaat
caggatggtattggtgaccgatgcgacagtgattttgatcgcgacggcgtggatgatccc
tacgatgcttgcccagagaaccccaacatcttcagcaccgatctccgaacctaccagaca
gtcgtcctagatcctgaaggcgaggcccaagtcgaccccaagtggatcgtctttgacgag
ggtcgtcagatcatgcagaccatcaacagcgatccgggactcgccatttcctaccaggcc
tttgacggggtggacttcgaagggaccttctacgtcaacacccgaacggatgatgacttc
gcaggctttgtcttcggataccaggactcggctagcttctacgttctgatgtggaagcaa
ggtccgcagacctactgggaggccgcccccttcagggccgttggtgaaccgggtttccag
ctgaaggttatcaagtcggatactggcccaggcgagatgatgagaaacgctctatggcat
acaggagatacgccgggacaggcacgtcttctttggaaggatccaaataaccatggttgg
aaggatcacgtggcctacaggtggagggtcatacacagaccttccataggactcattaga
gtaaagttgtacgaagcagacacgttggtggctgactccgggttcctccgggacacgacg
atgagaggaggaaggattggtttgttctgcttctcacaagaagatatcatctgggccaga
ataacctacaaatgtaacgataatataccggagggcgtggtcttctga
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