Lytechinus pictus (painted urchin): 129261990
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Entry
129261990 CDS
T09066
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129261990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129261990
03016 Transfer RNA biogenesis [BR:
lpic03016
]
129261990
03012 Translation factors [BR:
lpic03012
]
129261990
04131 Membrane trafficking [BR:
lpic04131
]
129261990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpic04147
]
129261990
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129261990
Transfer RNA biogenesis [BR:
lpic03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129261990
Translation factors [BR:
lpic03012
]
Eukaryotic type
Elongation factors
129261990
Membrane trafficking [BR:
lpic04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
129261990
Exosome [BR:
lpic04147
]
Exosomal proteins
Proteins found in most exosomes
129261990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
129261990
NCBI-ProteinID:
XP_054755991
LinkDB
All DBs
Position
5:43343802..43360691
Genome browser
AA seq
462 aa
AA seq
DB search
MVKEKIHINIVVVGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYVTVIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLCFTLGVKQLIVSVNKMDSTEPPYSESRFNEIVKEVSTYTKK
VGYNPKAIAFVPISGWHGDNMLEKSDKMKWFKGWAVERKDNNATGTTLFEALDSILPPKR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGTMKPGLVATFAPANITTEVKSIEMHHESIM
EAMPGDNVGFNIKNVSVKEIKRGMVCGNSKDNPPKEAQSFNAQVIIMNHPGQIHAGYQPV
LDCHTAHIACKFSSLLQKIDRRSGKVQEENPKYVKSGDAAIATLVPSKKMVVESYTEFPP
LGRFAVRDMKQTVAVGVVKSVEKAEAASSKMTKSAQKATKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaaaagattcatatcaacattgtggttgtcggccacgtcgactcggggaaa
tctacaactaccggtcatctcatctacaagtgcggtggaatcgacaaacgtgccatcgaa
aagttcgagaaggaagctgccgagatgggaaagggatctttcaagtatgcctgggttctt
gacaagctgaaggcagaacgtgaacgtggtatcaccatcgacattgctctctggaaattt
gaaacaaccaagtactatgtgactgtcattgatgcacctggtcatcgtgatttcatcaag
aacatgattacaggaacctcacaggccgactgtgccgttttgattgttgctgctggtact
ggtgagtttgaggctggtatttccaagaatggacagacacgcgagcatgctctcctctgc
ttcactctgggtgtcaagcagctcattgtatccgtgaacaaaatggacagcaccgaaccc
ccgtactctgagtcacgtttcaacgaaattgtgaaagaagtctcgacgtacaccaagaaa
gttggctacaatccaaaggccattgcatttgtcccaatttcgggatggcacggtgataac
atgcttgagaaatcagacaagatgaagtggttcaagggctgggctgtagaacgcaaggac
aacaatgctactggaacaacattgttcgaagccctcgattccattctaccaccaaagagg
ccaacggataaggctcttcgtcttcctctccaagatgtttacaagattggaggcattgga
acggttccagtgggtcgtgttgagacaggaacaatgaaacctggccttgttgctactttc
gcccctgctaatattaccactgaggtgaaatctattgagatgcaccatgaatcaattatg
gaggctatgccaggtgacaatgttggtttcaatatcaagaacgtctcagtgaaggaaatc
aagagaggtatggtctgtggaaacagcaaggacaaccctccaaaagaagcccaatcattc
aacgcacaggtcattattatgaaccaccctgggcagatccacgctggctaccagccggtt
ttggattgccatactgctcatattgcctgcaagttctccagcctccttcagaagattgac
cgtcgatcaggcaaggtacaagaggaaaaccccaagtatgtcaagtctggtgatgccgct
attgctacattggttccttccaagaagatggttgtcgagtcctacacagaatttcctcct
cttggtcgttttgctgtccgtgatatgaagcagaccgtcgccgtgggtgtggtaaaatcc
gtcgagaaggcagaggcagcaagcagcaagatgaccaagtctgctcagaaggctacaaag
aagaaatag
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