Lytechinus pictus (painted urchin): 129262007
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Entry
129262007 CDS
T09066
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129262007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129262007
03036 Chromosome and associated proteins [BR:
lpic03036
]
129262007
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129262007
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129262007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
129262007
NCBI-ProteinID:
XP_054756006
LinkDB
All DBs
Position
5:44449023..44500488
Genome browser
AA seq
1948 aa
AA seq
DB search
MFGGSKTPFGGTSSFGTGNTSFGGTTPATGGFGTPNAFGQSTPAGGGLFGSNPSTSTSGG
LFSGGTSSFGQPSSTAFSFGNKTTSASGSLFGGTSTSTGGGLFPTPSASTSFGGSTAFGA
GGGNKPLFGTSTSSTSLFGQSSTSTTPFGQTSTQQPSGGLFGGTTGSGLFGASQQQNGTT
IKFAPTTGSDTMVKNGASTNVNTKHQVITAMKEYTNKSFEELRAEDYLANRKGGSSGGGL
LGATGMTSTDNKPSLFGQPASTASSAFNFGGQSKSTFGSTPSSFGTGTSLFGGNNNQQQQ
QQQQQQQQSGGLFGSKPLFGQTSTSTAGSGLFGQSSGTSLFGQNPTQQKNLFGGTSQTPG
TGLFGSTPGSTGSTGFGTGGFGTGTFGQQTQQGGLFGKTAPNFGTPASQTGLSLGTSTGT
GGLFGATSKPGLTLGTGTGTGFGTTGFGSGAGTGSSLFGGSKGTTGFGTGGLSGGTFGTG
NLGSTFGGGTSGSLFGGTKPAGLGTTFGTTGAFGGGLGGTTGLTGGGIGAAQGVGGQQAN
VDMNTQVQQQLMTLFNSPYGDNPLFKNILVDSDKKKDALPGSSAQKSLSSPSHYKVSARP
GAKLRPKLLQRGGGKSKLFDGLEEEDNTLNSETFVTRRSIKKLVIKNKGSQDDSRNESYH
GSRSSVKPDELASPLPVYPRDQSNTSVRLTPDKDDEEPNTSDIPLFNKPKVLEDTTAMES
PGNKHEDPDCTIHAMNAQPKRQQRKRSGSGAAPTPPISSLSPGRSPPASTKEPLNVSRGS
QGDVSLEVSGEDEILDQENQPPPHPAKVVLRRTGYYTIPTLRELADLTDDDGNCFVDDFT
VGRERYGSVFFPGMTNVKGLNLDDIVHFRRKEITIYPDDTCKPTVGTGLNKKAEVTLDQT
WPIDKSTRQPIKDPERLVSLEYEERLERATAKLGAKFIEYRPETGSWVFQVQHFSKYGLT
DSDEEDGGQPQQQQGQKGVKKVDKAPAKEPAKPPPAKQKDEKQKSSSTRAPLQENGSIQY
LPEEPMREELAMDTVSDRAVPRSRGLGGQMIQDQYMAGEAGDFDTYMPCDDTDQHPGPDE
VMEGGQRSLDVSHRLAEAIGVSSHRMQVMKASFFAEEEEEPFAHSGSFANAPGRDGERRI
PRPSREPLFEREQAGDMWQASMMGSPAKFLAGMSSPLLQGRVASPIPRFLRESMDTRDQV
PVMPAGMSPQEKIPKIVGARPHLSMAPLEDSVVFERHDHIADSGLMMGRSFRVGWGPNWT
LVHSGKAVGVQGFRPKIKEEPMPFTLLTSKSMVKPATESSPFKVTLEKVNIAPMFGKPGH
TSRMYERSLGVELDHSMCSTAQPCPAFAPQSGIDALHRYAKESVTDKKEGTGYDPELLEH
TRLVWALMVALWGQLPEEEGKGPLDPTSYPYRKARRKAMSQWLSDSCRKHIDDEVQDSKF
RHLGHVEAIFALLTGRQINEACLKAQEFGDHRLALLLAQAGATHEARHLVGTQLIHWEQL
RADQFIADEYLKVYSLLAGQLVWQSSRGAVNVCEDLDWKRALAVHLWYHNYQEASIADGL
QAFEDGFTGKSALSDYCLPPRPPYMESNPGFYKEDMSALESMDDGDGLMPSRDRFPVWDM
CYHLLKLYCDKTHRMHNVLAPTAHSPYQLDYRLSWHVLQVLHALGYTHLSPHRQAHLTIS
YASQLESIGLWHWAAFVLLHVPNDIAREDLVRSLLGCHITLELTGNQLTPQESFLVDRLH
VPVEWIHDAKALRALYEGREREEAWHLLKAGRWNDCHMVLIKKIAANAIINESYGFLKGV
LDELSYVERSSLIQDWSTNGQVYLDFININERLVELGRREPTTFEVEKLHPDIASLCLRV
GGVYCQTVKDRVCRSEMAKRTANMMKAVLTLQQESLASAAGSSPTRQPNPLIPSRLLAPH
VTKLPLPEDYSLQELRQLTRSYTQELTA
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggggaagtaaaaccccttttggggggacatcatcatttgggacaggtaatacc
agctttggtgggaccacgcctgctaccggaggctttgggacccccaatgcctttggacaa
agcacccctgcaggaggaggactttttggatccaaccctagtacttcaacttcaggtgga
ctgttcagcgggggtaccagttcattcggacagccaagcagtacagctttcagttttggg
aataaaaccaccagtgcatctggtagtctatttggaggtaccagcaccagtacaggaggg
gggttgttccccaccccctctgcatccacgtcctttgggggttccaccgcctttggtgcg
ggaggcggcaacaaaccactgtttggtacaagcacttctagcacgagtctgtttggtcag
tcgtcgacctccaccacaccgtttggtcagacgagcacccagcagccctcagggggtctc
ttcggagggactactgggagtggactctttggggcatcacaacaacagaatggcaccact
atcaagtttgcgcctaccactggttctgatacaatggttaaaaatggtgcatctaccaat
gttaacaccaaacaccaagtcatcaccgccatgaaggaatacaccaataaatcatttgag
gaattgagagctgaagactacctggccaatcgaaaaggtggatcctctggtggcgggttg
ctaggggcaacaggaatgacctcaacagacaacaagccgagtctatttgggcaacccgct
tccacggcaagcagcgcattcaactttggtggtcaaagcaagagcacgtttggaagcact
cccagctcctttggcactggcaccagcctttttggtggcaacaacaaccagcaacagcag
caacaacaacaacaacaacaacagagtggcgggctgttcggaagcaagcctctctttggt
cagacgtcaaccagtacggctggaagtggtctcttcggacagtcgtcagggacaagcttg
tttggccaaaacccaacccaacaaaagaatctatttggtggaacgtcacagaccccaggc
accggtctatttggaagcaccccaggctcaacaggttcaacaggctttggtacgggagga
ttcggaaccggtacctttggacagcagacccagcagggtggcctattcgggaagaccgcc
ccgaactttggaactcccgccagccagacgggtctgagtcttggaaccagtacagggacc
ggaggtctgtttggagccactagcaagccaggactaaccctgggaaccggaacaggtaca
ggattcggtacaacaggttttggaagcggtgccggtacagggtccagtctgtttggaggt
agcaagggcaccacaggctttggtacagggggattgtctggcggtacctttggtacaggc
aacctaggttcaacctttggtgggggcacttccggttctctctttggaggtaccaagcca
gcgggacttgggacaacctttggaaccacaggtgcatttggtggtggtctgggaggcact
actggtttgactggtggaggaattggagctgctcaaggagtaggaggtcaacaagccaat
gtcgatatgaacactcaagtccaacagcagttgatgactctcttcaactcaccttatggg
gacaaccctctcttcaagaacatacttgtggattctgataagaagaaagacgctcttcct
ggaagttccgctcagaagtcactgagctctccatcacattataaggtgtcagcgagacca
ggagccaagcttcgaccaaagctgcttcagagaggcggaggaaagtctaaactctttgac
ggattagaggaagaagacaacacacttaactcagaaacatttgttaccagacgaagcatc
aagaagcttgtcataaaaaacaaaggaagtcaggatgactcaaggaatgaaagctatcat
ggttctaggagttcagtcaaacctgatgagcttgcctcaccccttccagtctacccaaga
gatcagtctaatacatcagttcgtcttacaccagacaaagacgatgaggaaccaaatact
tcagacattcccctctttaacaaacctaaggtcttagaagatacaaccgccatggaaagt
cctggcaacaagcatgaagaccctgactgcacgatccatgcgatgaacgcacagccaaag
agacagcagagaaaacgcagtggctccggagctgcaccaaccccaccgatcagctccctc
tctccgggcagatcccctccagcatccaccaaggagcctctcaacgtcagcagggggagc
cagggtgatgtgtctctagaggtctcgggtgaagatgagatattagatcaagagaaccaa
cccccgccccaccccgccaaggtggtcctacgtcgcacggggtactataccatccccact
ctcagagagttggcagacctcaccgacgatgacgggaattgctttgtggatgatttcact
gtcggaagagagagatacggaagtgtcttcttccccggtatgaccaacgttaaaggcctc
aatttggatgatatcgttcactttagacggaaggagatcacgatctacccagacgacacc
tgtaagcctaccgttggtacaggactcaacaagaaagcagaggtgaccctagaccagacc
tggcccattgacaagtcaacgagacaaccgatcaaggatcctgaaaggttggtttccctg
gaatacgaggaaaggctggagagagcaacagccaagcttggagctaagttcattgagtac
cgtcctgagacgggatcttgggtgttccaggtccagcacttctcaaagtacggtctaact
gatagcgacgaagaggacggaggacagccccagcagcagcaagggcagaagggggttaaa
aaggttgataaagcccctgccaaggaaccagccaagcctcccccagccaagcagaaggat
gagaaacaaaaatccagcagcaccagagcacccctacaagagaatggaagcatccaatac
ctacctgaagaaccaatgagagaagagcttgctatggacacagtatctgaccgggctgtc
ccaagaagcagaggtctcgggggtcagatgatccaagaccaatacatggccggagaagcg
ggtgactttgacacctatatgccgtgtgatgatactgatcagcatcctggacccgatgag
gtcatggagggaggtcaaaggtcgttagatgtctcccaccgtctggctgaagccatcggt
gtgagctctcaccggatgcaagtcatgaaggcatctttctttgccgaggaggaggaagaa
ccgtttgcgcattctggatccttcgccaatgccccagggagggatggagaaaggaggata
ccaaggccgtcgcgggagcccttgttcgagcgagagcaggcaggagatatgtggcaagcc
agcatgatgggaagtccggccaagtttctcgccgggatgtcatccccgctgttacaaggt
agagtggcaagccctatcccgcgcttcctgagagagtccatggacaccagggatcaagtt
cctgtcatgccagctgggatgagtcctcaagagaagatcccaaagattgtcggtgcacgc
ccccacctcagcatggctccactggaagattccgtggtctttgagcgccatgatcacata
gctgattcaggactaatgatgggtcgctcttttagggttggatggggaccgaactggacg
cttgtccattctgggaaagctgttggtgtccaggggttcagacccaagatcaaagaagag
cccatgcctttcacgctgctgacatccaagtccatggtcaaaccagcgactgaaagctcc
cctttcaaagtgactcttgagaaagtgaacattgcacccatgtttggaaagcctggtcat
acgtcaagaatgtacgaaagatccctgggggtagagttagaccacagtatgtgttccaca
gcgcagccatgccctgcattcgcacctcaatctggtatcgatgccctacacaggtatgcc
aaagaatctgttacagataagaaggaaggtacagggtacgatccagaactcttagaacac
acacggttagtgtgggctctcatggttgccctgtggggtcaactaccagaagaagaaggt
aaaggtccactggatcccacaagctacccatatcgcaaggctaggagaaaagccatgtca
cagtggctctcagactcctgcaggaagcacattgacgatgaggtccaggactccaagttc
cggcacctaggtcacgtggaggccatctttgcgctccttaccggcaggcagatcaatgaa
gcgtgtctcaaggcgcaggaattcggcgaccacagactagcgcttctcctcgcccaggcc
ggtgccacccacgaagcccgccacctggtggggacgcaactcatccactgggagcaattg
cgagctgaccagttcatcgccgacgagtacctgaaggtttattcattacttgctggtcag
ttggtgtggcagtcttcgagaggagcggtcaatgtctgcgaggatctggactggaagaga
gccttggctgttcacctctggtatcataactaccaggaggcttctattgctgatggcttg
caggcatttgaggacggcttcactggcaaatcagcgcttagtgactactgcctccctccc
cgcccaccatacatggaaagcaatcccggtttctacaaggaagacatgagtgccttggaa
tcgatggacgatggggacggtctgatgccgagtcgagataggttccccgtctgggatatg
tgttatcatttgctgaagctctactgcgacaagacgcatcgtatgcacaacgtcctagct
ccaacagctcattcgccataccaattggactatagactcagctggcacgtcttgcaagtc
ctgcatgccttgggttatacccacctctctccccatcgccaagcacacctaaccatcagc
tacgcctcgcagcttgaatctatcggcctctggcattgggcagcgtttgtcctcctccac
gtccccaatgacatagcccgagaggatctcgtccggtcactcctcgggtgtcacatcacc
cttgagctgaccggtaaccagctgaccccacaagagagcttccttgttgaccgtcttcat
gtccctgtggagtggatccatgatgccaaggcattgagggcgctttacgaaggacgggag
agagaggaagcatggcatctcctgaaggctgggaggtggaacgattgtcatatggtcttg
atcaagaagatagcagctaatgccatcatcaatgagagttatggctttctgaagggggta
ctagatgagctgagctatgtcgaacggtcatcactcattcaggattggtctacaaacggt
caggtctacctggatttcatcaatattaatgagcgactggtcgagctcggtagacgagag
ccaacgacctttgaggttgagaagcttcaccctgacatagcatcactctgccttcgtgtc
ggcggggtctactgtcagacggtcaaggacagggtgtgccgttcagagatggccaaacgg
acggcaaacatgatgaaagccgtccttaccctacagcaagagagtctcgccagtgccgca
ggatcttcaccaaccaggcaacctaatcctctcattccatcgcgtctcctggctcctcat
gtcaccaagctccctctcccagaagattacagtctgcaggagctacggcagcttaccagg
agctacacgcaggagctcactgcatag
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integrated database retrieval system
