Lytechinus pictus (painted urchin): 129262153
Help
Entry
129262153 CDS
T09066
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129262153
09122 Translation
03013 Nucleocytoplasmic transport
129262153
03015 mRNA surveillance pathway
129262153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129262153
03041 Spliceosome [BR:
lpic03041
]
129262153
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129262153
Spliceosome [BR:
lpic03041
]
Common components
Common spliceosomal components
Cap binding complex
129262153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF5635
Motif
Other DBs
NCBI-GeneID:
129262153
NCBI-ProteinID:
XP_054756182
LinkDB
All DBs
Position
5:57298836..57318922
Genome browser
AA seq
781 aa
AA seq
DB search
MDTGHRSKRRRPDNAQIEERLESLITRVGEKSTSSLESNLEGLSGVLEADLPNYKAKIIK
ILCECAVALPEKITVYTTLVGLLNAKNFSFGDDFIEVLGKSMKDFMKNNEWSKARFVVRF
FADLVNCHVIEVASLLSLYENFVAVTEEPDIPQVRSDWFVYSVLSSLPWVGCSLDEKKGE
ELSKLMKSIEGYLGKRKKDHVPFLRVWHGENPHEQQDYLDSLWQQVSKLRRDQWLEKIIM
RPYMAFHSILSESSVHNLPPFTPPPDIVDLTYPIPKVVFRMFDPTDAPDGPPLPGALSIE
RYLVEDQISSLITTYYKDRKECAAQLLNYHAKKQVPLNYVIVEVMFGQLFNLPQSPRIHV
FYMSLFLELCKLQPGSLPQVLAQASEMLYERLEHMNLHSSDRFVNWFAHHLSNFQFRWSW
EEWTDCLNVDVDLPKPKFVIEVLAKCLRLSYHQRIVESVPETFAPLLPNPPDPIYKYGQE
GADSLPGHIVAQNLTDMIKKKASPEVIIEVLKDTPNPKDVDGMEDETSFNALKIDVFVQV
LLHLGSKSFSHSFSALAKFLPVLKELAVTEESQIYILRVIKDIWRNHSQRIAVLVDKLLR
TRVITCPAVANWLFSSYMTSSFTRMFVWEILHSTINTMNKHVKACEIELEEARQSAKRPD
DVDMESDDEDRYDISKAASEAKIDLLQEKLEGAQSEEKKLFLIIFQRFVMVLGEHMVSSE
NKEEDFRTPWFIHAIQRLQQIFLVHYHQVVKYTTTLENLVFTTDTDPTILEVFTAFRSLH
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggatactggccataggtctaaacgacgaaggccagacaatgcacagattgaagaaaga
ttggaatctttgatcaccagagtcggagagaagagtacttcatcgcttgagagtaatttg
gaggggctatcaggggtgttagaggctgatctacccaactacaaagcaaagattatcaaa
atcttgtgcgaatgcgctgtcgcacttccagagaagatcactgtctacaccacactggtg
ggtcttctaaatgccaaaaacttcagctttggtgatgattttattgaagtgctgggaaag
agtatgaaagacttcatgaagaacaacgaatggagtaaagcaaggtttgttgtgcgtttc
tttgctgatcttgtcaactgccatgtgatagaggtggcctcactcctttcgctctatgag
aactttgtggcagtcaccgaggagccagacattcctcaagtgcgctctgattggtttgtc
tactctgtcttgagcagcttgccatgggttggatgttcattggatgagaagaaaggagaa
gaactcagcaaactaatgaagtccattgaaggctatttaggtaaaaggaagaaggatcat
gttcctttcctccgggtttggcatggcgagaatccacacgaacaacaagattacttggac
agtctatggcagcaggtcagtaaactccgcagagaccagtggcttgagaagatcatcatg
cgcccctacatggccttccactccatcctgtcggaatcatcagtgcacaacttgcccccc
tttacaccccctcctgacatcgtagacctgacataccccattcctaaggtagtcttcagg
atgtttgatccaacagatgctccagatggaccacccctgccaggtgcactttccatcgag
cgatacttagtggaggaccagatcagttcactcatcaccacttactacaaagataggaaa
gaatgtgctgctcagttgttgaactaccatgccaagaagcaagtacctctgaattatgtc
attgtggaggtgatgtttggccaactcttcaacctccctcagtctccacggatccatgtg
ttctacatgtctctcttcctggagctatgcaagctccagcctggatccctcccacaagtt
cttgctcaagcctctgagatgctctatgagagattggagcacatgaacctccattcttca
gatagatttgtgaactggtttgcacatcatctcagtaacttccagttcagatggagttgg
gaagaatggactgattgtctgaacgttgatgttgatctgccaaagcctaagtttgtgatt
gaggtgctagctaaatgtctgagactgtcgtatcatcagcgcattgttgagagtgttcct
gagacctttgctcctctattaccaaacccacctgaccctatttataagtacggccaggaa
ggagcagactctctaccgggacacatcgttgcacagaacctgacagatatgatcaagaag
aaagcttcacctgaggtcatcattgaggttctcaaagacacacctaatcctaaagatgtc
gatggcatggaagatgagactagcttcaatgctttgaagattgatgtattcgttcaggta
ctccttcatcttggctctaaatccttcagtcattccttcagtgcacttgccaaatttctg
cctgtgttgaaagagcttgcagtgactgaggagagtcagatctatatcttaagggttatc
aaagacatctggaggaatcattcacagaggattgcggtcctagtagacaagctcctgcgt
acccgtgtgattacttgtcccgccgtggccaactggttgttctcttcctacatgacatcg
agcttcaccaggatgttcgtatgggagatccttcattctaccatcaacaccatgaacaaa
cacgtcaaagcatgtgagatagagcttgaagaggctagacagagtgccaagagaccggat
gatgtggatatggagagcgatgatgaggatagatatgacatctctaaggctgctagtgag
gctaagattgatctactccaagagaagctagaaggagctcagagtgaagaaaagaaactc
ttcctcatcatatttcagcgttttgtgatggtgttgggagagcacatggtatccagtgag
aacaaggaagaagatttccgcacaccatggttcatccatgctatacagaggttacaacaa
atatttcttgtgcattaccatcaggtcgtgaagtacactaccacccttgagaaccttgtt
tttacgaccgacaccgacccaactattctggaggtctttacagctttccgctctctccac
tcatga
DBGET
integrated database retrieval system
