Lytechinus pictus (painted urchin): 129262155
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Entry
129262155 CDS
T09066
Name
(RefSeq) recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03440
Homologous recombination
lpic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129262155
03460 Fanconi anemia pathway
129262155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpic03032
]
129262155
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129262155
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129262155
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129262155
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
129262155
Bloom's syndrome complex (BTR)
129262155
FA (Fanconi anemia) pathway
129262155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
DUF3456
Motif
Other DBs
NCBI-GeneID:
129262155
NCBI-ProteinID:
XP_054756184
LinkDB
All DBs
Position
5:complement(57364142..57392307)
Genome browser
AA seq
1526 aa
AA seq
DB search
MSSHRNFNFKLSRSGKFKPPASNTVPPTAAGAAAAVSQTSLKSFFKPNPTNQSTGGGNAQ
LKNIEGHGNVKTSAKDVFRDQTNQFMTLHSNIMDNGNSVISSPSNGRKPVASVQPFTPSA
KKNVSPPQNFFNLDDLSDDEDFDFLEPTMPPKKHFSFKSKQPNSKPSIIEGKKDECYPAF
EKDDSDSDEDVIGSAKKSQKGLAVILDSDSDDGEEDVLKGEDNAIHIDWSETQLPEEAES
KAPDFDDEEDLTCIDNEPPPSLGPVAETQYDFIDVPSPSPPPSPGDFNIDIQWDSLPSPP
PIEAEDDAFPPPASPSPPSSPVFKQTQHTPPARQRNRIPEEDIIAIPPSQDMKPGVKLGD
KGQAQIPMEERIDDISSLTAHPALKPLTDQMNADELQDRLQSLDSLLYEVMDRICNTMDI
YLRSMHSSTGDVTSPPQLATLKQLSVLRKRVKAKQKQVQSRQKHTGVPVSKTLPTQTLLT
SRPTGHSFANSTLSSTGRLASNFLEPSSDDYPPTTDFSNQDGYSSHERNSESRYETPMSN
ERSSGPASSFQFKTPSSTVTPRSLSSKRTSLNQSTISGTSLPGFMSTSSGFSSPGANGAG
GTGRVSSPLPSGGDSFFEVEDTDTPGSSGYQSRTSSSFQTPSTFGASRFDTPQSVPDIRG
RSSFDQGRSDDGGSSRPGMMGVGTKRQSATQALSQTAIPSSNLSQDLSEMPAEVVSDNPF
SGYNFPHSRELHKVFRKTFGLHQFRENQLEAINAALLGKDCFILMPTGGGKSLTYQLPGV
LTAGVTIVISPLKSLIQDQVQRLVSLEIPATHLSGEMSGAAADGIYRQLCMRDPVVKMLY
VTPEKISASQKLLSTMEHLYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLCKLREKFPGV
PMMALTATATPRVKTDILHQLKMKKPQVLTSSFDRSNLMFRVEKKQPSKMIERITKLINS
QFKGKSGIIYCLSRNECEKVADDLTKAGIKASPYHAGQSDKERSTVQTRWINDQYKVVCA
TIAFGMGIDKADVRFVIHYSIPKSIEGYYQEAGRAGRDGGIAHCVLFYSYQDVTRLRRMI
EKGSDNYNAIKVHVDNLYGMVQYCDNIADCRRAIMLSYFGETGYNREICRRSRETTCDNC
QSSASFVEVDVTKEAKGLVQFVGDVSGNSTNRSRYKGPRRGNSQFTANHYADVLMGGNSA
KVNQSGHNNSPVYGILKKKEFQRGDSERLIRKLIIDGYLREEMFVGAHEQAICYVKVGQR
AFELLNGRCKVHLRMQESRASRAMSGKAPVISASAAAAAAIRDDIHQRLLDDLRATCRTL
AAENNMNTANIFNDATLREMTEKTPFTMEELLDITGVTEPKAKRWGQAFLQVMFKYLPEL
IPDDDMMEDEAFSSTTVKESPYFDNGGRGGQSASKTKRDRSRANRKPRPPKRKASAQSNA
KAKRTRAASTAASSSGQGLSSPGWLTTVPGGGGGSGMSSKPMLSKFKFSGGKGKGTGGGG
SLGFMPDPKMKKARSFLGSGGGQYIG
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacatagaaacttcaatttcaagctgtctcggagtggaaagttcaaaccacca
gcatctaatacagtgccccctactgctgctggtgctgctgctgctgtaagtcagacatcg
ctgaaaagtttcttcaagcccaacccaaccaaccagagtacgggcggaggaaatgcccag
ctgaagaatatcgaaggtcatggaaatgttaaaacatctgccaaagatgtattcagagac
cagacgaatcagttcatgactttacacagtaatataatggataatggcaattctgttata
tcgtcacccagcaatgggaggaagcctgtggcatcagttcaacccttcacaccaagtgct
aagaaaaatgtttctcctcctcaaaacttcttcaacttggatgatttatccgacgacgag
gactttgatttccttgagccgactatgcctcccaagaagcacttttcattcaaaagtaag
cagccaaacagcaagccatcaatcatagaaggaaagaaagatgaatgttaccctgccttt
gagaaagatgatagtgacagtgacgaagatgtaattggttctgccaagaaatctcagaaa
ggtctagctgttatcttggatagcgacagtgatgatggtgaggaggatgttctaaaagga
gaagataatgctattcatatagattggtcagaaactcagctgccagaggaagctgaaagc
aaggcaccagactttgatgatgaggaggatctgacatgcattgataatgaaccaccaccg
tcactaggtcctgttgctgagacccagtatgacttcatagatgtaccatctccatctcct
ccaccctcacctggggacttcaacattgatatacagtgggattccctcccttctcctcct
cccattgaggcagaagacgatgccttccctcctccggcctctccatccccaccgtcgtcc
ccggtcttcaagcagacccagcacacccctccagcaaggcaacgtaacaggattccagag
gaggacatcatagcgattcctccatcccaagatatgaagccaggagtaaaactgggagac
aaaggacaagcccaaatacctatggaagaaagaattgatgatatatcatcactgacagca
catccagctctcaaaccacttacagatcagatgaatgcagatgagctgcaagatagactc
caatccctggacagccttctctatgaagtcatggacaggatatgcaatacaatggatatt
tatcttagatccatgcattcatctactggagatgtgacatcaccgccacaacttgccacc
ctcaagcagttgtcagtattacggaagagagtgaaagctaaacagaagcaagtgcaatca
agacaaaagcatacaggagttcctgtgtcaaagacattaccgactcagacgctcctcacc
agtagaccgacaggacattcttttgccaactcaaccttgagcagtactgggcgattagcc
agcaactttcttgaaccatcctctgatgattatccaccaaccacagacttcagcaatcaa
gatggatacagttctcatgaacgaaactctgaatcaagatacgaaacaccaatgagcaat
gaaaggagttctgggcctgccagttctttccagtttaaaaccccatcctcaactgtaaca
ccaagaagcttatccagtaaaaggacatcactgaaccagtcaactatctcagggactagc
cttccaggattcatgagcacatcctcgggtttctcctctcctggagccaatggagcagga
ggaaccggaagagtgtcttctccgttgccttctggtggtgacagcttctttgaagttgag
gatacagacacaccaggatccagcggctatcagagtcggacttcctccagcttccagacc
ccaagcacgtttggagcaagtcggtttgatacgccacagagtgtccctgacatcaggggt
cggtccagctttgatcaagggaggtcagatgatggtggttccagtcgaccagggatgatg
ggtgtcggaacaaaacggcaatcagcaactcaagcgctctctcaaactgctattccatca
tcaaatttgagtcaagatttaagtgagatgccagcagaagtggtctctgacaatccattc
agcggctacaacttccctcactcgagagagctccacaaggtcttcaggaagacatttggt
ctccatcagttcagggaaaaccagcttgaagccatcaatgcagccttacttgggaaagac
tgcttcatccttatgccaacaggtggaggtaaaagcttgacatatcaactgcccggtgtc
ctgactgcaggggtgaccattgtcatatcccctctgaagtcccttatccaggaccaggtc
cagaggttggtctctcttgagatccctgcaacccatctatccggggagatgtctggtgct
gctgccgatggtatctacagacagctctgcatgagagaccccgtcgtcaagatgctctat
gtcactccggagaagatcagtgcgagtcagaagctcttatcaaccatggagcatctctac
accagagggttactctcaaggtttgtcattgatgaagcacactgtgtcagtcagtggggt
catgactttcgtccagactacaaacggttatgcaagctacgcgagaagttccctggtgtg
cccatgatggccctgacagccacagctacccctagggtcaagacagacatccttcaccaa
ctcaagatgaaaaaacctcaggtattgaccagtagctttgaccgtagtaatctgatgttc
agagtagagaagaaacaacccagtaagatgatagagaggattacaaaactcatcaactca
caattcaaaggaaaatcaggaatcatctactgtctttcaaggaatgaatgtgagaaagtt
gctgatgatttgaccaaggctggaatcaaagcaagtccataccatgctggacagagtgat
aaggaacggtcaaccgttcagactagatggattaatgatcaatataaggtcgtatgtgca
accatagcatttggtatgggaatagacaaagcagatgtcaggtttgtgatccactactcc
atacccaagtctattgaaggttactaccaagaggctggtagggctggtagagacggtggc
atagctcactgtgtactcttctactcctaccaagatgtgactcgtcttaggcggatgata
gagaagggtagtgataattacaatgcaatcaaggtccatgtggacaatctgtacggcatg
gtgcaatactgtgataacattgccgactgccgtagagctatcatgctctcatactttggt
gagacagggtacaaccgagagatctgcagacgaagtagggagactacctgtgataattgc
cagtcaagtgcatcgtttgttgaagtggatgtgactaaagaggccaaaggtctggttcag
tttgttggtgacgtgagtgggaattccaccaacaggtcgaggtacaaaggacctagacga
ggcaatagtcagttcactgctaatcactatgctgatgtccttatgggtgggaattcagca
aaggtcaaccagagtggccacaacaacagtccagtctatggtatcctcaagaagaaagaa
ttccagcgaggagacagtgagagactgatccgtaagctcatcatcgatggttacctgcgg
gaagaaatgttcgtaggggcccatgaacaggctatctgttatgtcaaagttggccagaga
gcctttgaactgcttaacggcagatgtaaggtccatctacgcatgcaggagagtcgtgca
tcacgtgcaatgtcaggcaaagcacctgtgatatcagcaagcgctgctgctgctgctgct
attagagacgatatccaccaaagactactggatgatctaagggccacttgcaggactctg
gctgctgagaacaacatgaacacagccaatatcttcaatgatgcaactctacgagagatg
acggagaagaccccattcaccatggaggagttactagatatcactggagtaacggaaccc
aaggctaagagatggggccaagccttcctacaggtcatgttcaagtacttaccagaactt
attccagatgatgacatgatggaggatgaagctttctcatctacgactgtaaaagaatct
ccttactttgacaacggaggaaggggaggccagtcagcttctaagaccaagagggaccgc
agtcgagccaaccggaagccaagacctccaaaacgcaaggcaagtgcccagagcaacgcc
aaggccaaacgcactcgggctgcctccactgctgcatcgtccagtggtcaaggcttgagt
agccctgggtggctgacgaccgtccctggtgggggagggggcagtgggatgagttccaag
ccgatgttatcaaagtttaagttcagtggagggaaaggaaaaggaacaggtggtggtggt
agtcttggcttcatgccggatcctaagatgaagaaagcaaggagcttcctgggttccgga
ggtggacagtatattgggtga
DBGET
integrated database retrieval system
