Lytechinus pictus (painted urchin): 129262244
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Entry
129262244 CDS
T09066
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129262244
09122 Translation
03013 Nucleocytoplasmic transport
129262244
03015 mRNA surveillance pathway
129262244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129262244
03041 Spliceosome [BR:
lpic03041
]
129262244
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129262244
Spliceosome [BR:
lpic03041
]
Complex C
Other components
EJC/TREX
129262244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_fung
RRM_5
Nup35_RRM_2
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
129262244
NCBI-ProteinID:
XP_054756305
LinkDB
All DBs
Position
5:complement(62973439..62989112)
Genome browser
AA seq
167 aa
AA seq
DB search
MADVLDIHEAEGDEEFQVDEESDQSIQKLRQSVKKRKGRGFGAEGGIRTADDEFQGLEID
TSETGPQRSVEGWILFVTGVHEEATEEDVRDKFADYGEIKNTHVNLDRRTGYLKGYVLVE
FETFKEAQKAMDALNGEEILGQTINVDWAFVRGPHEVGSKKRSGRRR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttttggacattcacgaagcagaaggagatgaagaatttcaggttgacgag
gaatctgatcaaagtattcagaagctgaggcaaagcgtaaaaaagaggaaagggagagga
tttggcgctgagggaggaatccgtactgctgatgatgaattccagggtcttgagattgat
acaagtgaaacagggcctcaaagatctgtagagggctggatattatttgtgaccggagta
catgaggaggctacagaggaggatgtaagggataaatttgctgattatggagagataaag
aacacacatgtcaaccttgacaggagaacaggttacctcaagggctacgtgttggtggaa
tttgaaacattcaaagaagcacagaaagctatggatgccttaaacggtgaagagatctta
ggtcaaacaatcaacgttgactgggctttcgtcaggggaccacatgaagtaggatcaaag
aaaaggagtgggagaaggcgttaa
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integrated database retrieval system
