Lytechinus pictus (painted urchin): 129262284
Help
Entry
129262284 CDS
T09066
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129262284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129262284
03036 Chromosome and associated proteins [BR:
lpic03036
]
129262284
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129262284
Coactivators
SAGA/TFTC/STAGA complex
129262284
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129262284
STAGA complex
129262284
TFTC complex
129262284
SAGA complex
129262284
SLIK complex
129262284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
PROPPIN
WD40_like
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_Vps41
WDR54
Beta-prop_NWD2_C
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
129262284
NCBI-ProteinID:
XP_054756354
LinkDB
All DBs
Position
1:complement(45091989..45108716)
Genome browser
AA seq
604 aa
AA seq
DB search
MMKRVSNDQIQCAVLQHLKRRQYIDINSESVNRKNLKLTDSLREMASQSSRRKEMGAINS
VSCNSCDQEGDVFEQQFARFRLFIESSVDEYKLDLLRLLYPTFAHIYLQMISDGHRVNAH
NLYTKHKGCLQYQDSQDTKELMERLSSVQYSIDPLTDPFLAAFRDNKCVVEIGDDAVQYL
LRFLQSRDNSVLLSIINLHVDIKVRYSVPTSLQEGGEEFPQASSSSSSLSSASKQTSEEP
KKEDNKREVEREAFLSELRATIDKVQRGPPSVPSIILYSVLNAYQGLSCVSFSDDSQMLA
GGFEDSAVRLWSLTPKKLKTQSHDADVSRIRFAGDSLHSNIIEDSLGSECKLLRGHSDTV
YSSCFIPETPLLLSASGDATVRAWSMSTFSNVARYRGHKYPIWDLDVSPLGVYFCTASKD
QTARLWTPERTYPVRVLSGHLMDVDCVKFHPNCKYVATGSNDKTIRLWDITQGKSVRLLT
GHKSSVLCIAFAPNGKYLASAGEDRRVRVWDLATGGLMKELRGHTDTVYSLAFNPDSSML
ASGGADCTIRLWDIRQGVKHTVPESGGHSGEQMTSISSRQTHIHKLSFSKCNLLHAGGGI
AMAT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgtgtaagcaacgaccagatccagtgtgcagttcttcaacatctgaaaaga
aggcaatatattgatatcaacagcgagagtgtgaatcgcaagaacctcaaactgacagat
tcattgcgagagatggcttctcagtcatcaaggaggaaagagatgggagcaatcaactct
gtctcgtgcaattcatgtgatcaagaaggtgatgtctttgagcagcagtttgccagattt
aggctcttcatcgagagttccgtagacgagtataagttggacctcttgcgcttgctgtac
ccaacatttgctcatatttatttgcaaatgatctctgatggacatagagtaaatgcccac
aacctgtatacaaaacacaaaggatgtttacaatatcaagatagtcaagatactaaggag
ttgatggagagattaagcagtgttcagtatagtatagatccattgactgaccctttcctt
gctgcatttagagataataaatgtgtggtcgagattggagatgacgccgtccagtacctg
ctacgcttcctccagagtcgagataattctgttctactcagtatcatcaacttgcacgtt
gatatcaaagtgcgatattcggttcccacatccttgcaagaagggggcgaggagtttcca
caggcatcctcctcatcatcatcgctgtcctccgcctcaaaacaaacctcggaggaacct
aagaaggaagataataagagagaagtggagagagaggctttcctttctgagttgcgagcg
accattgataaagtccagagaggaccgccatctgttccctccatcatcttgtatagtgtc
ctcaatgcatatcaagggttgagttgtgtgagtttctcggatgattctcagatgttagct
ggtggctttgaggattctgccgtcagattgtggagtcttaccccgaagaaactcaaaacg
caatcccacgatgctgacgtcagtcgcatacgtttcgctggtgatagtctccatagcaac
atcatagaagatagtcttggatcagaatgtaagttactacgaggtcacagtgatactgta
tacagtagctgtttcataccagagacacctcttctcttatcggcatcaggagatgctaca
gtgagagcatggagtatgagcaccttctcaaacgtagccaggtatagaggacacaagtac
cctatctgggaccttgatgttagcccgcttggggtctatttctgtaccgcctccaaggac
cagacggccagactctggaccccagagaggacctatcctgttagggtactttctggtcat
ctcatggatgtagattgtgtcaagttccatcctaactgcaagtacgtagcgacaggttct
aatgacaagacgattcgactgtgggacattactcaaggaaaatctgttcgtttattgaca
ggacacaagagttctgttttgtgcatagcttttgctccaaatgggaagtaccttgcatca
gcaggtgaagatcgtagggttcgcgtttgggacctggcgaccggaggtttgatgaaagaa
ctcagggggcacacggatactgtttattcgttagcattcaaccctgatagctcaatgctt
gcctcgggtggtgcagattgtactataagattgtgggacatacgacagggtgttaagcat
acagtacctgagagtggaggacattctggagaacaaatgacatcgatctcttcaagacag
actcacattcacaagctatccttttccaaatgcaacctcttacacgcaggcggaggtatc
gccatggcaacatga
DBGET
integrated database retrieval system
