Lytechinus pictus (painted urchin): 129262560
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Entry
129262560 CDS
T09066
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129262560
Membrane trafficking [BR:
lpic04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129262560
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
PPR_2
dDENN
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
129262560
NCBI-ProteinID:
XP_054756664
LinkDB
All DBs
Position
5:87176894..87211584
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AA seq
1849 aa
AA seq
DB search
MMGSDVYLCYKKSAIRGNSIVYQADMLSRYPLEDYEDFPLPQSIPFCMPMGAAIECWAET
REHPLPVFSTFVLTDIAGGKVQKVYGAAVTFYENYPEEKLSEQQREALQLKPTNNKNGPS
VYNIHVNKCICLLSHWPFFEAFKKFLSFIYRVSISGPRSIPIERHISHFMHEVPFPTPQR
PRILMELAHDQLILARPQTSPIPLSGASYCAMLRNLGPEKTLNVLAFLLLEHKLVLHSLR
PALLTGVAEAVSSLIFPFVWQCPYIPLCPLSLSDYLSAPMSVVVGIDSRYFDMYDPPSDA
ICIDIDTNTILQLEDKKGITWKILPKKPAKRLYNTLTKIYQDIQESAVGDGISDELAVEV
SPITLDFSLKKRQMQLEMRIQEAFLSFMAMILKGYSQYLLPITQQPSNRALDASSRFDSP
GFLKTRDKASQGFFKQFLRTQMFIKFIEEISFVSENDEKFAFFDDCIDKVDIDSKDDIHL
IDTESQVDSEHTVFVMPPDADGTGAQYHYTEFPVLISELFHAPTMEERDQLSTPRTKQGV
AQSPFPRRTKQEMRNSQKMAKMQAASPEQWANYLLGQSYALWFIHLPSYVKATHSKTRAL
RTAFEVLKKMQDKNIQLFDEVCYRVLMQLCGQYRQPVLAVQVFMEMRKRGIKPNAITYGH
YNKAVLECQWPASSFSSYQQWVKLRNTLAAVTQFRRGIKHRGSCSDTNSDVLSQGSGDSM
EPPGVILEPERGKDETDLIKLMEGTAAVNLTREEKSSTGNSDMGYASMIMDETTPNDLLT
SPELSPTKLARQRDSQCLDEEDEEAIKAQEEECDPDVACEEVARVDGEMEGVVEGRGEGE
EEQQEGEKEGECEQTFVADDDMSLASHTKEELSAEITHIKSRSAPVSEVSTPISRKRLDL
GGNDTPDGGLFGITDLEEEPRGRGSSILRRSRSSVTSREAVHGEMVLDTTHSSMNANTSL
LDASNLEDNPFDDSQLSDSSDTPRRRHKSAGEHSWSLAIRKRNSSGGDAAATITDSLATS
DSISEDKFGCDAKMLEKLRTSSESNQSGSHSRSLSCGSRPQYINQKSEEFPVEVNALDEA
GKEELLDVCHQIGTLNASEDRGSSEGMTDSGDDLLVAINEKNSQDTRQSGNADLIELVEE
DSKLKASSIPNGVHDIHVSPKHTTDKVSTDDDACDSNEKPLENGLGKTELYKLESMESLP
SNSSSNDTKDSIENLSSKPRKTPKRNSSFLSNLLTSPFTPRVSKQSISRTFQTASFQMQT
LRTHATDLASKFGEYTRQLSSPVIKDSQSNPSLIDIDETYGGIEIGGKSEPRDIAGSWNE
SKMESLNPEEMGIHMPGSQFAGSTQSLNNPMASDQEDGFNNPKRQYAMHVFMTSCFRCGA
CRSALYDEHIMAGWAADDSNLNTSCAFCGSPRVPFLTVTIKDLREPGGQCNLTPSPSAES
MQSIQSAPFLKQGETLPGKTDESNNTYQSNPSVDNLSLGSEGEGDPKPALTGRTMPARRE
PGLHHSAGETIIREQLKKPDGGMENSPSAARRRTVSECHSVDLLKEVDSSERPGNGYPAN
MRPGTSYSLPRCKTIQETSSASLLADFSTFSTSSLPSSMRGSREYLAPPPRKDTDPDPVN
VPYLSPLVLRKEIENVIDNEGEECLRQPAFVFQHPIIFWNLIWYFKRLDIPNYLEGALLA
AYSENRDPNDGGRYLATDSRYVKVTILWDNLSLYKEDGIPMYLHWTPNAQAIKNAIDAPD
KPDFSSSFMLQIVKCIRFNNVFLPITMLLDEFTRQNIAVGEHRSIYRELLFLSFLALGRD
NVDHDAFDQQYRVAYSKLREDQKEKMQKNDRPPPRAVQMCRTVFCDLSL
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgatgggatctgatgtctatctctgctacaagaaatcagcaatccgaggaaactcaata
gtttatcaagcagatatgttgagtcgttaccccttggaggattacgaggatttccccctc
ccccagtccatccccttctgtatgcccatgggggctgccatcgagtgctgggcagagaca
agggagcatccccttcctgtattctctacgttcgttctcacggatattgctggtggcaag
gtacaaaaggtctatggagcagctgtgacattctacgagaactaccctgaggagaaacta
agcgaacaacagagggaggccttgcagctgaagcctaccaacaacaaaaatgggccatcc
gtctacaacatccatgtgaataagtgcatctgtctgctctctcattggcccttctttgag
gcctttaaaaagtttttgtctttcatctaccgggtctccatctctggaccgcgatctatt
cccattgaaaggcatatctctcattttatgcatgaagtccccttcccaacacctcagaga
cctagaatattaatggagttggcccatgaccagctgatcttagccaggccccagacctct
cctatccctctaagtggagccagttactgtgctatgctgaggaatctaggaccagagaag
accctcaatgtcctggctttcctactcctagaacacaagctggtcctgcactcccttaga
cctgctcttcttactggtgttgcagaagctgtgtcgtcgcttatcttccctttcgtatgg
caatgtccatacatccccctctgcccactcagtctgtcagactacctgagtgctcccatg
tcagtggtagttggtatcgactcacgctactttgacatgtatgaccctcccagtgacgct
atctgcattgacattgataccaatacaatcttgcagctcgaggacaagaaaggaataaca
tggaagatactaccaaagaaacctgcaaagagattatataacacattgactaagatatac
caggacatccaggaatcagctgttggtgatggcatctctgatgaacttgcagttgaggtg
tctcccatcacgctggacttcagcctcaagaaacgacagatgcaattggaaatgaggatc
caggaagctttcctatccttcatggcaatgatactgaagggctatagtcaatatctactc
cctatcacacaacaacccagtaatagagctctggatgccagctcaagatttgactcccca
ggttttctgaagacaagagacaaggcatcccaagggtttttcaaacagtttctgagaact
cagatgttcatcaaattcatagaggagatctcatttgtctcagaaaacgatgagaagttt
gctttctttgatgactgtatagacaaggttgatattgacagcaaagatgacattcatcta
atagacacagagagtcaggttgatagtgaacacacagtctttgtcatgcctcctgatgca
gatggaacaggtgcacaataccactacaccgagttcccagtattgatatcagagctgttc
catgctccgacaatggaggaacgggaccagctgtccacgcccaggaccaagcagggcgtg
gctcagagtccattcccccggaggaccaagcaagagatgagaaattcacagaagatggct
aagatgcaggctgcatcaccagaacagtgggctaactatctcttgggacagtcctatgcc
ctttggtttattcatttaccgtcctatgtgaaagcaactcattctaagacaagagcactc
agaacagcctttgaagtactcaagaagatgcaggacaagaacatccaactcttcgatgag
gtatgttatcgagtactaatgcagctatgtggacagtacaggcaacccgttttagctgtg
caggtctttatggaaatgaggaaaagaggaattaaaccaaatgcaatcacatatggtcac
tataacaaggctgtcctagaatgccagtggccagcttcatcattcagcagctaccagcag
tgggtgaagcttcgtaacacccttgctgcagtcacccagttccggcgtggcatcaagcat
cgtggcagctgctctgataccaatagcgatgtcctcagccaagggagtggtgacagtatg
gagccacctggagtgatacttgaaccagaaagaggcaaggatgagactgatctcatcaag
ctgatggagggtacagctgcagtcaaccttacaagggaagagaagagcagtactggcaat
tctgacatgggctatgcctccatgatcatggacgagaccacacccaacgacctcttgacc
tctcctgaactctctcccaccaaactagcccgccagcgtgactcccagtgcctggatgag
gaagatgaagaggctatcaaagcccaggaagaagagtgtgaccctgacgttgcttgtgag
gaggtcgctagagtagatggagagatggagggggttgtggaggggagaggagaaggggag
gaagagcagcaggagggggagaaagaaggtgaatgtgaacagacctttgtggcagatgat
gatatgtcacttgctagccacacaaaagaggaactgagtgcagagatcacccacatcaag
tcccgtagtgcacctgtcagtgaagtctccacccctatcagtcggaagaggcttgaccta
gggggtaatgatacccctgatggtggattgtttggtatcacagatcttgaggaagaacca
agaggtaggggcagtagcattctgaggagatcaaggagtagtgttaccagtcgggaagct
gtgcatggtgagatggttttggatactactcattcatcaatgaatgccaacacatcgctg
ttagatgccagtaatcttgaggataatccgtttgatgattcacaactttcagactccagt
gacactcctcgtaggaggcacaaaagtgcaggagaacactcttggtcattagcaatcagg
aaacggaacagcagcggtggtgatgccgcagccaccatcaccgacagtcttgccactagt
gattccatcagtgaggataagtttggttgtgatgccaaaatgcttgagaaattgcggact
agtagtgaaagcaatcagtctggtagtcactctcggtcgttgtcctgtgggagcagaccg
caatatatcaaccagaagagcgaggagttccctgtggaggtgaatgccttggatgaagcg
gggaaggaagagttgttggacgtttgccatcagattgggaccttgaatgcgagtgaggat
agggggagctcagaaggaatgaccgactctggtgacgatctcctggttgctattaatgag
aagaactcacaagataccagacagagtggcaatgctgatttgattgaactagttgaagaa
gatagtaaactgaaagcttccagtatccctaatggtgttcacgacatacatgtgagtcct
aaacacactacggacaaagtcagtactgacgatgatgcatgtgacagtaatgaaaaacca
cttgagaatggcttaggtaaaacggagctgtacaaacttgaaagtatggaatcattacct
agcaactcttcatcgaacgacactaaagactctatagagaacctgtcatcaaaaccgcga
aagacacccaagcggaattcaagcttcctatccaacttgctgacgtcaccattcacaccc
cgcgtgtccaaacagtccatcagtcgaaccttccaaacggcttcatttcagatgcagacc
ttgcggacccatgccacagaccttgcctccaagtttggagagtacaccaggcagctctcc
tcccctgttatcaaagacagtcaaagcaatccaagcctcattgacattgatgaaacttat
ggagggatagagattggtggcaagtctgaacccagagacattgctggatcgtggaatgaa
agcaaaatggaaagtttaaatcctgaagagatgggtatccacatgcctggctcacaattt
gcaggtagtacacagtctctcaataatcccatggcttctgatcaagaagatggttttaac
aacccaaagaggcagtatgctatgcatgtcttcatgactagttgcttccgctgtggtgct
tgccgatcggccctctacgatgaacatatcatggctggatgggccgccgatgattcaaac
cttaacacaagttgtgcgttctgtggatcacctcgcgtaccattcctgactgtgaccatc
aaggaccttcgggagcctggaggacaatgcaacctgactcccagcccgtctgcagagagc
atgcagagtatccaatcggctcccttcctgaagcaaggggaaaccctccccggtaagacg
gatgaatctaacaacacctaccagtcaaatcccagcgtcgataacttatctcttggtagc
gaaggtgagggtgacccaaagcctgccctgacagggaggaccatgcctgccagaagagaa
ccaggactacatcactcagcgggagaaacaataataagggaacaactgaagaaacctgat
ggagggatggagaactcaccttctgcagccaggaggcggactgttagcgagtgccatagt
gttgatttgctgaaggaggtggactcttcggaaaggccagggaatgggtaccctgccaac
atgcgtccaggaacttcctacagtctaccccgttgcaaaaccatccaggagacctccagt
gccagcctcctggctgatttctccactttctccacctccagtctcccctccagcatgcgc
ggctccagggagtacctagctccacctcctcgcaaggacacagatcctgaccctgtcaat
gtgccgtacctaagccctctggtgcttcgcaaggagattgaaaatgttattgataatgag
ggtgaagagtgtctgaggcagcctgctttcgtgttccagcaccctattatattctggaat
cttatctggtatttcaaacggcttgatatacccaattatctagagggtgcccttctagct
gcctacagtgaaaacagggatccaaatgatggtggtcgttaccttgcaactgattccagg
tacgtgaaggtaacgatcctatgggacaatctgagtctttacaaagaggatggtattccc
atgtaccttcattggacacctaatgcacaggctatcaagaatgctatcgatgcaccagac
aaaccagatttctcaagctcattcatgctccagatagtgaaatgcatccgatttaataac
gtgttccttccaatcaccatgttactggatgagttcaccagacaaaacatcgctgtagga
gagcatcgtagcatctatagagaactcctcttcctctccttccttgcccttggaagggat
aatgttgatcatgatgcgtttgaccagcagtaccgagtggcctactccaagcttagagag
gaccagaaggaaaagatgcaaaagaatgaccgtcctccacccagggctgtccagatgtgc
cgtactgtcttctgtgatctcagtttatag
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integrated database retrieval system
