KEGG   Lytechinus pictus (painted urchin): 129264126
Entry
129264126         CDS       T09066                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129264126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpic03021]
    129264126
   03036 Chromosome and associated proteins [BR:lpic03036]
    129264126
Transcription machinery [BR:lpic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129264126
   Coactivators
    SAGA/TFTC/STAGA complex
     129264126
Chromosome and associated proteins [BR:lpic03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     129264126
    STAGA complex
     129264126
    TFTC complex
     129264126
    SAGA complex
     129264126
    SLIK complex
     129264126
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_SCAP NBCH_WD40 CFAP251_N DSE1_N PAC11 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_SPT8 Tricorn_2nd ASA1 WD_LRWD1 WD40_RFWD3 Beta-prop_ELP1_1st Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_NWD2_C WD40_like PROPPIN Beta-prop_ACSF4 TRM82_WD WDR54 RAB3GAP2_N B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 129264126
NCBI-ProteinID: XP_054757966
LinkDB
Position
1:20147561..20159244
AA seq 444 aa
MTSSGEELPSEEMEDDLPPLLQAARNADVTTFKKMLEDGEDVLQKDEKKKPKKDPQASKK
NKPDPNAPPQTRIPLPELKDADKLERLNAQRELSKRVHLGPDNLPSICFYTFLNAAQSRL
ISVDVSNDSGLLAAGFSDSLIKVWTLTPQKLRKVKQAGALKEIDAESDDILERIMDDSTA
TDQRVLLGHSGPVYSTSFSPDRKFLLSSSEDTTIKLWSMYTYSSLVAYRGHNFPVWDVQF
GPFGHYFASGSKDKTARLWATEYHQPLRIFAGHLSDVDTVRFHPNSNYIATGSSDKTIRL
WDMNTGKCVRVMTGHKGPIHNIIFSPNGHYLASTGEDKRVLLWELRHGNLIRELNDHTAP
IYSLSFCQDGNVLASGGLDNCVKLWDVKKIFAETEPDELSSTPAIVTSSASNVLLGSYPT
KTTSVFNLHFTRRNLLLASGPFTS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacgtcgtctggggaagagctaccatcggaggagatggaggatgacctccctcccctc
cttcaggctgcgagaaatgccgacgtcacaaccttcaagaaaatgctcgaagatggcgag
gatgtcctgcaaaaagatgagaaaaagaagcccaagaaggatccccaagcatccaagaag
aacaaaccagatcctaatgcccctcctcagaccagaataccacttccagaattgaaagat
gctgacaaactagagagattgaatgcacagagggagctctcaaaacgagtccatctcggg
ccagataacttgccatctatctgcttctatacgttcctcaatgctgcacaaagtcgattg
atctctgtggatgtgagcaatgattcgggtctgctagcagcaggtttctcagattctctt
atcaaagtatggacgttaacacctcagaagctaaggaaagtcaaacaagctggagcattg
aaagagatagacgctgaatctgatgatatcttggagagaatcatggatgacagcactgct
actgatcaaagagtcctgttgggacatagcggacccgtgtattccaccagcttcagtcct
gataggaagtttctcctctcttcatcagaagacaccaccatcaagctttggagcatgtac
acatactctagtctggttgcataccggggacataacttccctgtctgggatgtccagttt
ggaccgtttggtcattactttgcttcagggagtaaggacaagacagccagactgtgggct
acagagtatcaccaacctctcaggatatttgctggacatctttcagatgtagatactgtg
aggtttcatcccaactccaactacattgccactggctctagtgataagactatcaggctg
tgggacatgaacacagggaaatgtgttagagtaatgacaggacataagggtccaatccac
aacatcattttttcacccaatggtcactacttggcatcaacgggagaagacaaaagagtg
ttactatgggaactacgccatggcaacctcatcagagaactaaacgatcacacggcacca
atctactcacttagcttctgtcaagatggcaatgttttagcctcgggtggtcttgataac
tgcgtcaagctttgggatgtcaagaaaatctttgcagaaacagaaccggatgagttgagt
tcaacacctgctatcgttacatctagtgcttcaaatgttctactaggctcttacccaacc
aaaaccacttccgttttcaatctacacttcactcgtcggaatcttcttcttgcatcggga
ccgttcacatcgtag

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