Lytechinus pictus (painted urchin): 129264163
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Entry
129264163 CDS
T09066
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129264163
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
129264163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF1771
DUF1542
Motif
Other DBs
NCBI-GeneID:
129264163
NCBI-ProteinID:
XP_054757996
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All DBs
Position
7:6088114..6103493
Genome browser
AA seq
710 aa
AA seq
DB search
MAMGHDPSMTMHMLVVNNMQSLDSLPRSFSSFHPTIDKLVFLFYCCCQELLTLAKRKKVE
PESAKESTSQKSNSESETSESDDDWTLGGNKKKSRIKKNPKKKVARSASDGSGVISDSDK
SSLEEGEVSDSESDDSDSGSDDEKFFDGYDENFIGDEEDRAMLEKMTEKEREQVIYNRSE
KRDALRTRYEIERKLKKEKKERKKQKREEMMKQAASAPSAAAAAAAPTPNSAVNVYNSSR
ENRSKERRQTIETKYDKKARAIEDLKALREKKKKSVENAPSRKELLKASDVYTDDEDDDD
DDDEEDDDEERKEDPRSSDPSDASSEASDSDRDDDDDEQMTMYVSTKEELNRIRLTRNKM
EKWVHMPFFPHTTIGCFVRIGIGQNNGRPVYRVAEIIDVVETAKVYPLGSTRTNKGLRLK
YASQERVFRLEFVSNQDFTDTEFKRWHEDMINGDYDLPTINDVENKEAIIKRALNYKYKE
EDIEKIVHEKERFRKNPRNYAMKKTELRKARDQALIEGDEDRAKGLSQKLTDLEERAQEL
DRIRNREVNAITYINQRNRNRNIAESEVAMKEEIKEIENAPPDPFTRRHCRPQLVTKARE
DTADILKRLEEERLMQEKAEKEKREQEEMKKRREEDIIASLTQEAVPAKVADRKVSEDLF
QAHDFDIKIDLDVSIPESRPISAVNSERDPQGAPRRSLNLDEYKKMRGLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccatgggccatgacccatccatgaccatgcacatgttggtcgtaaataatatgcag
tctttggattctctgccaagaagcttttcttcctttcatcccactattgataagcttgtt
ttcttattttattgctgttgccaggaactacttactttagccaaaaggaaaaaggtggag
ccagagtcggccaaggaatcaacttcacaaaagagcaattctgagtctgagacatcagag
agtgatgatgattggacactgggtggcaacaaaaagaaatccaggatcaagaagaaccca
aagaaaaaggtggctcggtcagcatctgatggatccggggtcatcagtgactctgacaag
tcttcacttgaagaaggagaagtgtctgattccgagagtgacgattccgattccggttcc
gatgatgagaagttctttgatgggtacgatgagaacttcatcggggatgaggaggatagg
gcgatgctggagaagatgacagagaaggaaagagaacaagtcatctacaacagatcagag
aagagagatgccctgaggacaaggtatgaaattgaaagaaagctcaagaaagagaagaag
gagcgcaagaagcagaagcgtgaggaaatgatgaaacaagctgccagtgcaccgtcggct
gccgctgctgctgccgcacccactccaaacagtgctgtcaacgtctacaacagctccaga
gaaaaccgtagcaaggaaaggaggcagaccattgaaactaagtatgacaagaaagcaaga
gctatagaggatctcaaagccctcagggaaaaaaagaagaaatcagttgagaatgcaccc
tcaaggaaggaactcctgaaagccagtgatgtgtacacagacgatgaagacgacgatgat
gacgatgatgaggaagatgatgatgaggagaggaaggaagatccaagatcgtccgatcca
agcgatgcttcttctgaagcttcagactcggatagagatgatgacgatgatgagcagatg
accatgtatgtttctaccaaggaggaattgaacaggatcagattaacaaggaataaaatg
gaaaagtgggttcatatgccctttttcccccacacaacgattggctgctttgtacgtatt
ggcattggacagaataacggcaggcctgtttatagagtggcagaaataattgatgtagta
gaaacagccaaggtatacccccttggaagcacacgtacaaacaaaggtctcagactgaaa
tatgcttcacaagaacgtgtcttcagattggaatttgtctcaaatcaggatttcacagat
acagagttcaagagatggcatgaagatatgatcaatggagattatgacctgcccaccatc
aacgatgtggagaacaaagaagcaatcatcaagagggcgctcaactacaaatacaaagaa
gaagacattgaaaagattgttcatgaaaaggaaagattcaggaaaaacccaaggaactat
gcaatgaaaaagacagagctgaggaaagcgagggaccaagcattaatagaaggagacgaa
gacagggccaaaggtttatctcagaagctgacagacctagaagagagggctcaggaactg
gacaggatcagaaaccgtgaagtcaatgcaatcacgtacatcaatcagaggaacagaaat
aggaatatagccgagtccgaggtggccatgaaagaagaaatcaaagagattgaaaacgcc
ccaccggatcccttcacacgcaggcattgtagaccacagctagtgacaaaggcgcgtgaa
gatacggcagatattctcaagagactggaagaagagaggcttatgcaggagaaggccgaa
aaggaaaagagagaacaagaggagatgaagaaaagaagggaagaagatatcattgcctca
ctgacccaggaagcagtcccggcaaaggtcgcagataggaaggtatccgaggatctcttc
caggcccatgactttgacattaaaattgacctcgatgtttctataccagaatcccgaccc
atctctgccgtcaactcggagagagaccctcaaggtgctccacggaggtccctcaacctg
gacgagtacaagaagatgagaggactcatctaa
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