Lytechinus pictus (painted urchin): 129264318
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Entry
129264318 CDS
T09066
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
lpic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129264318
04120 Ubiquitin mediated proteolysis
129264318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129264318
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129264318
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129264318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_16
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING-like
FANCL_C
zf-RING_5
zf-HC5HC2H
PHD_NSD
zf-HC5HC2H_2
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
129264318
NCBI-ProteinID:
XP_054758151
LinkDB
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Position
7:complement(3815937..3830269)
Genome browser
AA seq
610 aa
AA seq
DB search
MGKLFKKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFGPRFVAMFTLLLFIKCF
HWLAEDRVDYMERSPVISWVFHMRVITLLVVLGCFDLVFINYAYHSTLTKGASVQLVFGF
EYAILLTVLINVFFKYVLHTIDLQSENPWENKAVYMLYTDLIMGFIKVFLYTAFVAIMIK
IHTFPLFATRPMYLAMRSFKKAVHDVIMSRRAIRNMNTLYPDATAEDLANTDSICIICRE
DMVAAEPGAPAGGSGSCKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRLSVVAASQRL
RQGQQQQQGVGQQGQAGLGLGQQGNGQVPPVPGQGMPPFPPGFQFWLPQYQGGVPPFPQP
PVPPQPSSSSTTQPGTSTSTPSTAASQATSPGTPSSGGASAATPTSLGTSLPNFPPPPSM
GAPGMGMFPPMMPPFMMPFGMSPPMPPPNFSGLSDEELRAMEGMERQHVQARIECLQNIQ
ALLDAAVIQMQQYSTIVSGLGVPTVPVTPASTNTTSATSTVPTPTVQTEASAAPPTTPSE
PETLTSTAEANASESSNDLSALEGAVGFTSLVKDIKDEEVEPVPESPEDQERDEVRRRRL
QRLSSNTSTS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggggaaactcttcaagaaggtgttctttggccagctcagagctgctgagatggagcat
ctaatagaaagatcatggtatgctgtgacagaaacctgcctggcattcaccgtgttcagg
gatgacttcggtcctcggttcgtggccatgttcacactgcttctcttcatcaaatgtttt
cattggctggcagaggatagagtcgattatatggagaggagtccagtcatctcttgggtg
tttcatatgagagttattacccttcttgtggtccttggctgctttgacttggtgtttatc
aactatgcgtatcatagtactttaaccaagggagcttccgttcaacttgtcttcgggttt
gagtatgcgatcttattgactgtgttaatcaatgtgttcttcaagtatgtcttgcacacc
attgacctacagagtgagaatccatgggaaaacaaagctgtgtacatgctttacactgac
ctcattatgggttttatcaaagtgtttctttacacagcgtttgtggccatcatgatcaag
atccatacattccctctttttgccaccaggcctatgtacttagccatgaggtctttcaag
aaagctgtacatgatgtcattatgtctagaagagccatccgtaatatgaacacactgtac
cccgatgccaccgccgaagacctcgccaacaccgacagcatctgcatcatctgccgagag
gacatggtggcagcggagcccggtgcaccggcaggaggctccggaagctgcaagaagctt
ccttgcaaccacatcttccacagcagctgcctccggtcatggttccaacgtcagcagacc
tgccccacctgcagaatggacgttctcaggctttccgtggtggccgcgagccagaggctc
aggcaggggcagcagcagcagcagggggtggggcagcagggacaggcggggttgggtctg
ggacaacaaggcaatggacaagtgccacctgtaccagggcaaggtatgcccccttttcca
ccaggcttccagttttggcttcctcaatatcaaggaggagtgcccccctttcctcagccc
cctgtaccccctcaaccgtcatcatcctcaactactcaaccaggtacttcaacatcaacg
ccatccactgcagcttcacaagccacatcacctggaacaccatcatcaggaggagcgagt
gcagccacgcccacatccttgggtacatctctaccaaacttccctccacctccaagcatg
ggtgctcctggtatgggtatgttccccccgatgatgcctccattcatgatgccatttggc
atgtcacctccaatgcccccacctaacttcagcggtctgtctgatgaagagcttagggcc
atggaaggcatggagagacagcacgtccaagccaggattgaatgcctccagaacatccag
gctctcctcgatgctgcagtcattcagatgcaacagtacagtaccatcgtctcaggatta
ggtgtgcctaccgttcctgtcacaccagcctccaccaacactacatcagccacctctaca
gtccccacccctacagtacagacagaggcatcagctgccccgcccaccacacccagtgaa
ccagagacattaacatcgacagctgaagccaacgccagcgagtcaagcaatgatttatca
gccttagagggcgccgttggcttcacatcgcttgtcaaggacatcaaggatgaagaagtg
gaaccggtgccagagagtcccgaggaccaggaacgcgacgaggtcaggaggagacggtta
cagagacttagtagcaacacatcaacttcatga
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