Lytechinus pictus (painted urchin): 129264326
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Entry
129264326 CDS
T09066
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpic03036
]
129264326
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129264326
microRNA pathway
RISC loading complex
129264326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Dicer_PBD
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
129264326
NCBI-ProteinID:
XP_054758162
LinkDB
All DBs
Position
7:4274931..4310126
Genome browser
AA seq
1812 aa
AA seq
DB search
MEEPSPLSLGLEVIDAETPGSSFVTSQKEFTPILSFTPRQYQLELLETALEQNTVVYLQS
GTEKTFLAVMLIKELSWSVRMPVKDGGKRSIFLVNSESYLSKCGNVIHTHTDLDVKEYRN
REEMSSWDKAKWQDEIEHCHVAVMDSEIFLKLLQMSFVDLSMFNLLILDEFHHTLNYLHP
YHHVMLTLRTCPREDCPRILGLSESVLKMDFKPVALEKQIELIEENLKCKAKIATNLTSI
SKYGTKPKEAVIVCRKYGDCVELVSKLSQLLTGSLKQLNQFKYSFKAKDFDGELVDCNRD
PVLPAKQALTECLSALMTIGPLGVKILIPMLVRELLKLERHEFLDVHLLFLQHAVTQLRM
VERICDNALREGGNFYNLKFLTPRVRRLLEILAEFKPKEASPEEKAQQSASRERTNKFAS
RRKAHRSHKDMKNPRWRPVVPEDQDEDEASDEEEEEEEDGPDADIQQTGRSTTNLCGIVF
VEHRYTAAVMSRLFKKLSKRDPRLHFLLCSCIAIGSGRLGVAKKSAVQAQNQRRKNEEVL
RKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPTSYQSYMQSKAKARAPTSHFLM
LIDEPDVPPFLKDVQSYQEFERVLNRKSRSKIQQKEEEVDLLLADQQMPAYVPKNEEGSP
RASMTTAIQIINRYCAKLPSDVFTHLTASCKIEERKGEVSPEFQATLQLPINSPIREPIR
GQWMKRKKWATMAVAVKTAEILHKAGQLNDFLQPIGKESVLKVTENVYNHLFAEGQTRPG
TTKKRQYYDKEVAKCLQGCLPRPDEPCYLYSIDMSLASPLPDILNIRERKLHRPEETHQC
FGILTSKQIPKVPGFPVYTRAGELAVTIKLQSDAKRLSGNQIRRAQSFHGCMFSEVLRLD
KPNLELNPEKSQASYLIVPLKEGPDSGPSVIDWSFLEEVSLSSGHLDQPPQLPDYSQSQF
EFSTDILANAVVTPIYRNIDQPQRYFVADILYDLPVTSPFPSEKYETFVDYYFERYDIQI
SNFQQPLVDVDCMSSRLNLLTPRYLNHKGKALPISTGQNKKGNLQKKQYLVPELCYIYPI
PASLWRKAVCLPSILYRLNALLIAEELRVQVAEEAGIGLKKLPEEYPYPNLSFGWEGLDL
EALERQEKEAKEAARCDLDEGNAIYVEPKCNNYKQLKENERAAESELQTSQIKDVEMNEQ
LNTPCDQSRLERSRRDGNMNSTNENKETFDDGKFHLDDDGYDPQKCLGPSPTIILQSLTM
SNSSDGFNLERLEMLGDSFLKQAVTVYLYCSYPQLDEGKLSFLRSKQVSNFNLYCLGEKK
KLAHKMQVSLFDPSINWLPPCLLVKESSKPVIKEENETDQDAGFVIDTWDPSTVEGVDDF
DDDDFDSDQGWEENSDDVSEEEIDETKAECPDDFFAREEKDEEQWSFSVGDPDDVPGLTY
TGAKTQDVGSVPPLPYEIHTQHSMSDKSIADCVEALIGCYLMSCGFRSALLLMAWMGLDV
LPTMEGHSKKQDDQLSNHSSNPAADLSVSCRYGYLKQPESPLSRSVPNAKKVLKEQLVGY
EHFEKTINYRFKDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITRHLYDHHTN
LSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMD
SQLKYSDGEEDESEDIEVPKALGDIFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYA
SDLPISPVRELLEMEPETARFGPPEKTIDGKTRVTVNVVGKGQFKGIGRNYHIAKATAAR
FALRHLKSHPQN
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccatcaccgctttcactggggttagaggtcatagatgcggagactccaggt
agctcctttgtcacatcacagaaggagtttacccctatactcagcttcactcctagacaa
tatcagcttgaactacttgaaacggctctggagcagaacacggtagtatacctgcagtct
gggacagagaagacattcttggcagtgatgctcatcaaggaactctcatggtcagtgagg
atgcctgtcaaggatggaggaaaaagatccatcttcctggtcaattcagaatcctatctg
tcaaaatgtggcaacgtaatccacacccacactgatttagatgtcaaggaatacaggaac
cgggaagaaatgagttcatgggacaaagcaaaatggcaggatgaaatcgaacattgtcac
gttgcggtgatggacagcgagatcttcctcaagctcttacagatgtcctttgttgacttg
tccatgttcaatctgctcatcctggatgagttccatcacaccctgaactacctccatccc
taccatcatgtcatgctcacattgagaacttgccctcgggaagattgccccaggattttg
ggattatctgaatcggttctgaagatggacttcaagccagtggctttagagaagcagatc
gagttaatagaggaaaatctaaagtgcaaagcgaaaatcgctactaatttgaccagtata
agtaaatacggcaccaagcccaaagaagcagtcatcgtctgtcgaaagtacggggactgc
gttgagttggtgtccaagctatcgcagctcctcacaggcagtctgaaacagctcaaccag
tttaaatactctttcaaagccaaggactttgatggggagcttgtagactgcaatcgtgat
cctgtactgccggccaagcaagcccttacagaatgcctgtcagccctgatgacgataggc
cctctaggggtcaagatcctcatcccgatgttagtccgagagctcttgaagctcgagagg
catgagttccttgacgttcaccttctcttcctgcagcacgcagtcacccagctcaggatg
gttgaaaggatatgtgacaatgctctcagagaaggaggcaacttttataacctgaagttc
ctgactcctagagtcaggaggctgttagaaattttggctgaattcaaacccaaggaggcc
agtccagaggagaaagctcagcagagcgctagccgggaaaggaccaacaaatttgcatca
cgtaggaaagcacacagatctcataaggacatgaaaaatcctagatggagacccgttgta
ccggaagaccaagacgaggacgaagcgagtgacgaggaagaagaggaggaggaagacgga
cccgatgccgatatccagcaaaccggtcgctcgaccaccaacctctgcggtatcgtcttc
gtggagcatcgttacacggcggcggtgatgagcaggctcttcaagaaactctccaagaga
gatccaaggctgcactttctcctctgcagctgcattgccattggcagcggaaggctcggg
gtggcgaagaagtcggctgtgcaggctcagaatcaaaggagaaagaatgaagaggtgttg
aggaagttcaggaggagagaagtcaatgtcttggttgctaccagctctgtggaagatggt
gtggagcttccccgttgcaatggctgcaacctcgtggtgcggttcgatcgacctaccagc
taccagtcttacatgcaatccaaggccaaggctagggcacctacatcccactttctcatg
ctcatagatgaaccggatgtaccgccattcctcaaagacgtgcagagctaccaggagttt
gaaagggttctgaataggaagagtagatctaagattcagcaaaaagaagaggaagtagat
cttctgttagccgaccagcagatgcctgcctatgtccccaagaatgaggaaggttctccc
agggcctccatgaccactgctatccagattattaacagatactgtgccaagctacctagt
gatgtcttcacccatcttactgcttcctgcaagatagaggagaggaaaggtgaagtcagc
ccagagttccaggccactcttcagttacctatcaattcacccatcagggaacccattaga
ggtcagtggatgaagcgtaagaaatgggccaccatggcggtggctgttaaaactgcagag
attctccataaagcaggacaactgaatgacttcctgcagccaatcgggaaggaatcggtc
ttgaaggtcacggaaaatgtttacaatcatctctttgctgaaggtcagacacgtccagga
acaactaagaagagacaatactatgataaagaagtagcgaagtgcctccagggatgcctt
ccaaggccagatgaaccttgctacctgtacagtattgacatgtccctggcctcacctcta
ccagatatcctcaacatacgagagaggaaactccacagaccagaggaaacacaccagtgc
ttcggtattcttacctcaaagcaaataccaaaggtgcctggttttccagtctataccagg
gcaggagagttggctgtgaccatcaagcttcagtcagatgcgaaacgactgagtggtaat
cagatcaggagagcccagtcctttcatggctgcatgttctctgaagtgctacggcttgac
aagcctaacctagagctgaacccggagaagagtcaagctagctacctcattgtgcctctc
aaagaaggtcctgatagtggcccttctgtcattgactggtcattcttggaggaggtcagc
ctgagttctggtcatctagaccaacctcctcaacttccggactacagccagagccagttt
gagttctccacggacatcctcgccaatgccgtggtcacaccaatctacagaaacattgac
caaccccagcgctactttgtggcagacatcctctacgacctccccgtgaccagtcccttc
ccgtctgaaaagtatgagacattcgtggactactactttgagcggtacgacatccagata
tccaacttccagcagccgctggtagatgttgactgcatgtcatctagactgaatctactg
actccaaggtatctgaaccacaaagggaaagcgttgccgatcagtacgggtcagaacaag
aaggggaacctgcagaagaagcagtacctggtccccgagctctgctacatctatcccata
cctgcatccttgtggaggaaagcggtgtgtcttccatccatcctctaccgattgaacgca
ttgctgattgcagaggaactcagggtacaggtggccgaggaggctggcattggcctcaag
aagctcccagaggaatatccctacccgaacctgagctttggatgggaaggactcgatctg
gaggcacttgagagacaagagaaagaggccaaagaagcagcaagatgcgatcttgatgaa
gggaatgcaatatatgttgaaccaaagtgcaataactataagcagctgaaagaaaatgaa
cgtgcagctgagtctgaactgcaaacaagccagattaaggacgttgaaatgaatgagcag
ctgaacacaccatgtgaccaaagtagactagaacgttctaggagagatggtaatatgaac
agtactaatgagaataaagagacatttgatgatggaaaatttcaccttgatgatgacggc
tatgacccacagaagtgccttggacctagccctactattattttgcagtccttgaccatg
tccaattccagtgatggtttcaacctagagaggcttgagatgcttggagactccttcctg
aagcaggcagtgaccgtctatctctactgctcctaccctcaattagatgagggtaagcta
tcattcctcaggagcaagcaggttagcaatttcaacctatactgcttgggtgagaagaaa
aagttagctcataagatgcaggtatcattgtttgatccgtccatcaactggcttcctccc
tgtctgctggtcaaggagagctccaaaccggtcatcaaggaagagaatgagactgaccag
gatgcaggatttgtcattgacacctgggatccttccactgttgaaggtgtcgacgacttc
gacgatgatgacttcgacagcgaccagggctgggaagagaatagtgatgatgtttcggaa
gaggagatcgacgagacgaaggcggaatgtccggacgatttctttgccagggaagagaag
gacgaggagcagtggtctttctctgtgggtgatccagacgatgttccggggttgacctac
accggtgccaagacgcaggatgtgggaagtgttcctcctctgccgtacgagatccacacc
caacacagcatgtctgacaagagcatcgcggactgcgttgaggccttgatcggttgctac
ctgatgtcttgcggcttccgtagcgcccttctcttgatggcctggatggggttggatgtc
cttccaaccatggaaggccactctaagaagcaggatgaccaattatctaaccattcctca
aaccctgcagctgatctttcagtgtcttgccgatacggctacctgaagcaaccagagtcc
cctctctcgaggagtgtgcctaatgcaaagaaagtactgaaggagcaacttgttggatat
gagcactttgagaagactatcaattatcgcttcaaggatagggcttacctgctccaggct
tttactcattcatcttaccaccgtaatagcattacagattgctatcagaggcttgagttt
cttggagatgccttattggactacctcatcactcgtcacctgtatgatcaccacactaac
ctctctccaggggcgctgaccgatctccgctcggcactggtcaacaacaccatctttgct
tccttggccgtcaagttcaacttccataagtacttcaaggcctacactgccaacatgttc
caagtcattgacaactttgtgacgtttgtcgatgcaaagaatgaagctttgggaatggat
tcgcagctgaagtacagtgatggagaagaggatgagtctgaagatattgaagtccctaaa
gctctcggtgacatctttgaatctgtcgccggtgctatctacctcgacagcggcatgtca
ctcaacgctgtctggaaggtctactatccgatgatgaagcaacagatagaacaatatgcc
tcagatctaccaatttctcctgtccgagaactgttagagatggaaccagaaacagcacgg
tttgggccaccagagaagaccatcgatggaaagacgagggtcaccgtcaacgtggttggt
aagggacagttcaaggggattgggcgtaactaccacatcgccaaggcaacggcggctcgt
ttcgccctacgccatctcaagagccatcctcagaattga
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integrated database retrieval system
