Lytechinus pictus (painted urchin): 129264382
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Entry
129264382 CDS
T09066
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
lpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129264382
09122 Translation
03013 Nucleocytoplasmic transport
129264382
03015 mRNA surveillance pathway
129264382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129264382
03041 Spliceosome [BR:
lpic03041
]
129264382
03009 Ribosome biogenesis [BR:
lpic03009
]
129264382
03012 Translation factors [BR:
lpic03012
]
129264382
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129264382
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129264382
mRNA cycle factors
Stress granule specific factors
129264382
Spliceosome [BR:
lpic03041
]
Complex C
Other components
EJC/TREX
129264382
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
90S particles
Helicases
129264382
Translation factors [BR:
lpic03012
]
Eukaryotic type
Initiation factors
eIF-4
129264382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129264382
NCBI-ProteinID:
XP_054758227
LinkDB
All DBs
Position
7:complement(8250376..8263333)
Genome browser
AA seq
398 aa
AA seq
DB search
MTRRVLSQEAQNITFETSEEVDVTPTFDSLSLREDLIRGIYAYGFEKPSAIQQRAIKPVV
KGRDVIAQAQSGTGKTATFSISILQCLDTQLRETQALVLSPTRELATQIQKVILALGDYM
SVQCHSCIGGTNVGEDIRKLDFGQHVVSGTPGRVFDMIRRRNLRTRAIKMLVLDEADEML
NKGFKEQIYDVYRYLPPATQVVLFSATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQ
FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQ
KEREAIMKEFRSGASRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRYGR
KGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtcgcgtgctgtcacaagaggcccaaaatatcacttttgagacgagtgaagag
gtggacgtaaccccaacatttgactcactttctctcagagaagacctcattagaggaatt
tatgcatatggatttgaaaaaccatctgcaatccagcaaagagccatcaaaccagttgta
aaaggcagggatgtaattgcacaggctcaatctggtacaggaaagactgccaccttttct
atttccattctacaatgtctagacacacagctcagagaaacacaagcgttggtgctatct
ccaacaagagaattggccacacaaattcaaaaggttatcctagccttgggtgactatatg
agtgtccagtgtcattcctgtattggtgggacaaatgttggagaggatattagaaaactt
gactttggtcaacacgtagtctcagggacacctggcagagtctttgacatgatcaggaga
agaaatttgaggacgagagccatcaaaatgctggtcctggacgaagcagatgaaatgttg
aacaaaggcttcaaggaacagatctatgatgtgtacaggtacctacctcctgcaacccaa
gtagtactcttcagtgccacattaccacatgagatcttagaaatgaccaacaaattcatg
acagatccaatcagaatccttgtcaaacgtgatgaattgaccttggagggtatcaagcag
ttctttgttgccgtggagagggaagaatggaagtttgatacgttgtgtgacctctacgat
acactcaccatcacacaggctgtcatcttctgcaacacgaagaggaaggttgactggttg
actgaaaagatgcgggaagcgaacttcacggtgtcgtccatgcatggcgacatgcctcag
aaagagagagaagccatcatgaaggaattcagatcaggggctagtcgtgtccttatcact
accgatgtatgggccagaggtctggatgttcagcaagtgtccttggttatcaactatgat
ctgccaaacaaccgtgaactctacatccacaggattggtcgttcaggtcgttacggacgt
aaaggtgttgctatcaactttgtgaagagtgatgacatcaggattctgcgtgacatagag
cagtattacagcacacagattgatgaaatgcccatgaatgttgctgatctcatctag
DBGET
integrated database retrieval system
