Lytechinus pictus (painted urchin): 129264647
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Entry
129264647 CDS
T09066
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129264647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129264647
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129264647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
TIP49
AAA_5
AAA_14
AAA_22
AAA_28
AAA_2
AAA_33
AAA_18
NPHP3_N
ABC_tran
RNA_helicase
nSTAND3
Mg_chelatase
AAA_17
NACHT
AAA_3
IstB_IS21
Rad17
TsaE
Viral_helicase1
Vps4_C
Parvo_NS1
NB-ARC
Zeta_toxin
Cytidylate_kin2
CPT
V-ATPase_G
Motif
Other DBs
NCBI-GeneID:
129264647
NCBI-ProteinID:
XP_054758534
LinkDB
All DBs
Position
7:complement(27023440..27054987)
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AA seq
967 aa
AA seq
DB search
MSPGKHSRQSNSDRKQCSTNYYGDRLLLKRVQEYVDSESKNGYVDVDAMVEDLQHIYKEY
GRKKRIVFKKAVEKAYNCIESRQSRSDHNLDEFEARHLSKRRKQEDDAEEDSNSDSFSSD
NPDYVQVQDSNLVNSSLSNLYMKRTPTSTPKSRSAASTPLATPLVTPHATPRPSDREDDD
RDSMEMGTVTLDLAGFSDLMEDDGKQISRKPKLLMPNVKKKEEPVSDKSSQNSSFYISKT
PSKINSKDVKTPSRKSSTKGEDGTEASTKKKPRSSESEGPRKGKKKVIEPQRSTSTFADI
GGNDSTLEEVCKLLVHMRHPEVYQQLGVSPPRGVLLHGPPGCGKTLLANAIAGELDLPYL
KLAATEIVSGVSGESEENIRDLFEQAQALAPSVLFIDEIDAITPKRETAQREMERRIVAQ
LLACMDELNNGTSHVMVIGATNRVDSLDPALRRAGRFDREISLGIPDEKARTRILHVLCR
KLRLSDDFSYHTLSALTPGYVGADLTALCREAAMAAVNRVFTYFQNTGKPISATTLGTSL
HPDGTASASDQPRLQHTAVSSQHVTATLQGQATSATEEMDTGSVNELVSESSRSDSDLKE
SESYKMVLSWLKEHPPLSESQLEGLYITMEDFKVALPNVQPSAKREGFATIPDVTWDDVG
ALEGVREELTMAILAPVRNPEAYHALGLTNPPGILLAGPPGCGKTLLAKAIANESGINFI
SVKGPELMNMYVGESERAVRQCFQRARNSSPCVIFFDELDALCPRRSDVSDSGSSARVVN
QLLTEMDGLEARKQVFIMGATNRPDIIDPAVLRPGRMDKILYVGIPSNQDRKAILRTITK
NGCKPVLEKEVNLNDLAEDSRCNGFTGADLAAFVREASMSALRKVIRNGLLLERGDPAAS
SQRDSNVVVCRDDFEAAFRKVKPSVSRKDRIFYERMRSSVLRDASACDEDAMSKKPEESN
EDPKTLP
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaggaaaacattccagacagagtaatagtgatcgcaaacagtgctcaaccaat
tactacggagatcgtttacttctcaagagagtacaggagtatgttgactccgaatcaaag
aatggctatgtggatgtagacgccatggtggaagatcttcagcatatttacaaagagtat
ggcagaaagaaaagaatagtctttaagaaagctgttgaaaaagcttacaattgcattgaa
tccaggcagtccagatctgatcataatctggatgaatttgaggcaaggcatctgtcaaaa
cgacgtaaacaagaggacgacgctgaagaagactcaaacagtgatagtttctcatctgat
aatccagattacgttcaggttcaggattccaacctagtcaacagttccttgagcaacctt
tacatgaagagaacccccaccagcacccccaaaagccggagtgctgcatccacgcccctt
gccactccccttgtcacaccccacgccacacccaggccttcagacagggaagatgatgat
cgagacagcatggagatgggtactgtgacccttgaccttgcagggttcagtgacctgatg
gaggatgatgggaagcagatatccaggaagccaaagctattgatgccaaatgtcaaaaag
aaggaggaacctgtatcagataagtcatctcagaacagtagtttttatatatctaaaaca
ccgagcaagataaacagtaaagatgtcaagacacctagtcgaaaatcatctaccaaaggt
gaagacgggacggaggccagcaccaaaaagaaacctcgctcctcagaatctgaaggacct
aggaaaggaaagaaaaaagttattgaacctcagcgatccacaagcacctttgctgatatt
ggaggaaatgatagcaccttagaggaggtatgtaagcttctggtccacatgaggcatcct
gaagtctaccaacaactgggagtgtctccacccagaggggtgttattacatggaccacca
gggtgtggcaagaccctcctagctaatgctatcgctggggagttggaccttccgtacctg
aagcttgcagctacagagatagtgtctggcgtatcaggagagtcggaagagaacatcaga
gatctctttgaacaagcacaggcattagctcctagtgtgttattcatagatgagatagat
gctatcactcccaaacgagagactgctcaacgtgagatggagaggagaatagttgctcag
ctgttagcctgtatggacgaactgaataatggaacttcacacgtgatggtgattggtgcg
acaaacagagtagattctttagaccccgccctgaggagagcaggaaggtttgatcgggag
atctcattgggtataccagatgagaaagcaaggacaaggatcttacatgtgctttgtcgt
aagctgcgtctgtctgatgacttcagttaccacaccctatcagctttgacccctggctat
gtgggcgctgacctgacggcattatgcagggaagcagctatggctgctgttaatagggta
ttcacctacttccaaaacacaggaaaaccaatatcagctacaactctcgggacatcactg
catcctgatggaactgcatcagcctctgaccaaccacggctacaacacacagcagtatcg
tcacaacatgtcactgccacattacaaggacaggcaacttcagcaacagaggagatggac
acagggtcagtcaatgagttggttagcgagtcttcaagaagtgattcagatttgaaggaa
tcagagagttacaaaatggttctaagttggttaaaggaacatcctcctctttctgaaagc
cagttagaaggtctctacatcactatggaagatttcaaggtagcgttacccaatgtccaa
ccgtcggctaaacgagaaggttttgctaccattcctgatgtgacgtgggatgatgtcgga
gctctagaaggggtcagggaggaactcacaatggctatcctggccccagtacgtaaccca
gaagcctaccacgcccttggcctgacaaaccctcctggtattctcttagctggaccacca
gggtgtggaaagacactccttgctaaagctatagccaatgaatcaggaatcaactttatt
tcagtcaaaggtccagaattgatgaatatgtatgtaggagagagtgagagagcagttcgc
caatgcttccagagagcaaggaattcctcaccatgtgttatattctttgatgaactggat
gcattgtgtccaagaagatcagatgtttctgattctggatcaagtgccagggttgtcaat
cagttgttgaccgagatggatggcttagaagctcggaagcaagttttcatcatgggggca
accaatagaccagacataattgatccggcagtactacgtccaggaagaatggataagatc
ctatatgtaggaattccttcaaatcaagataggaaagcaatactcagaaccatcacaaag
aatggttgtaaacccgttttggagaaagaagtaaacttgaacgatcttgcagaagattca
agatgtaatggattcacaggtgcagacttagctgcatttgtccgtgaagcgtcaatgtca
gcactgagaaaggtcattaggaatggtctattattagagaggggtgaccctgctgcttcc
tctcagagggactcaaatgttgttgtctgcagagatgactttgaggcggctttcaggaaa
gtgaaaccatcagtgtcaagaaaggatcgtatcttttacgagaggatgagaagcagcgtg
ctcagggatgcgtctgcatgtgacgaggatgctatgtcaaagaaacctgaggaaagcaat
gaggatccaaagacattaccataa
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