Lytechinus pictus (painted urchin): 129264660
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Entry
129264660 CDS
T09066
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lpic03012
]
129264660
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129264660
Translation factors [BR:
lpic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129264660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
RWD
HA2_N
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
AAA_22
AAA_19
ResIII
nSTAND3
NPHP3_N
zf-CCCH_2
Cas3-like_C_2
ATPase
Vma12
Motif
Other DBs
NCBI-GeneID:
129264660
NCBI-ProteinID:
XP_054758550
LinkDB
All DBs
Position
7:28137579..28164852
Genome browser
AA seq
1448 aa
AA seq
DB search
MSQPSGAVRRGGKPNRGGGRANRGGRGGRGGGEGRGGEGRGGEGRGGGGGRGGGRGRGRG
GGGRGGEGRGRGERGSGRGGRGGARGGGGQQQGSNIKPYGPVADTGARKCKSVSMSYDYD
DDDFVLMPKQDKQKASSYQAPQTHQPKAYQSYQSNAPSRRRGNYQPSKVKMQSLHMSDEN
QELVKDILRELHGADLDLDMGLEDYEELDYDTDRHFWTDDNSLKVEASGSSFTPLGVWHE
EEDDRENKDDTQKISKYAVEKLIRCGYPKKDSLQALEDNDADAGLALEQLYKDFLKNHSI
LSEQDAADDSVTKESLIDQRQEEAFALSSIYESDFSERIPNHVWTLRLKLSHIDKSLKEA
QKNEKKKSAEKERENRRRKQNLCHFYQEGSCRFGSRCKFVHEAPWDTEDTEFDKFMDEDN
TKWYQLEVRFPSDNLYPWQPPIIAFSSTHPDFQSAKCLNVTKRLAEESLEHASSGNPAVF
SLVGVLEDEQEMRILLDGKPLPFQARKLPARTKLVVEDIEEESPDGETPLNEQSDSASGA
TVGDAEVLTGREGAKNLGRTLYVPPKRSKRDEERDSRRLKEQFKKAQTSNAYKSMLERRE
ALPAWKEQDNILGTLSKYQVLVVSGATGCGKTTQVPQFILDASLQGKGLDVSNIICTQPR
RISATAVADRVAKERTTRLGDVVGYQIRLENKQSSSTRLMFCTTGILLRRLESDPVLNGV
SHIIVDEVHERSEESDFLMMVLRDMLPQRPDLRIILMSATLNADLFSSYFFDCPVINIPG
KTFPVDQYFLEDAIEYTGYVLDENSPLARPIKKSNAVPSEASARAMSKVRCDNLDEEIAE
AFASTTFNPAKDNVKDANLTLQQMALRYKDYEMSTIKTLATIDPEKINNDLIEDLIKWVV
DGDHDYPKDGAILIFLPGLGEITDLYEQLQSSLCGPRKTKKYKLIPLHSSLSSEDQNAAF
DKPKEGITKIVIATNIAETSITIDDIVFVIDAGRMKEKRYDSGKRMESLETVWVSRANAM
QRRGRAGRVTAGVCFHLFSKHTFEHVLREQQLPEIQRIPLEQLVLRIKILDVFQGYHVKE
VLNKLLEPPKTENIDDAVQRLQDLGALTIDQDLTSLGYHLASLPVDVRIGKLMLFGAIFQ
CLDPVLTIAASLSFRSPFMAPFDKRDQADKKRQEFAIGNSDHLTLLRAYKGWTTAVERSN
YFSYRFCHENFLSVKTLQMIASMKHQFAELLGGIGFVGLDMTGRQMDRRSNGYGDMIIKA
CDPQINVNASNDRLVVAVLCAALYPNVVQVLTPEAKYTQSSAGAVPLNPKAQELKFKTKD
DGYVSVHPKSVNFQVRYFESPYLVFLEKIKTSKVYIRDCSMVSVYPLLLFGGCELNIDLK
GGEFIISLDNGWIQFRVKSIEVGELMRELRRELDQLLADKIQQPDMDLGSCPRGSRIIAV
IVQLISTQ
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccatcaggagcagtgagaaggggtggcaagccgaacaggggaggaggcagg
gccaaccgtggaggaaggggaggaagaggcggaggagaagggaggggaggagaagggaga
ggaggagaagggagaggaggaggaggagggagaggaggaggaagaggaagaggtagagga
ggaggaggtagaggtggagaagggagaggacgaggagaaagaggtagtggccgtggtgga
agaggaggagctagaggtggtggaggccagcagcaagggtcaaacataaagccctatgga
ccggtggcagacacaggagccaggaagtgcaagagtgtatccatgtcctatgactatgat
gatgatgactttgtactcatgcccaaacaggacaagcagaaggcatccagctaccaggcc
cctcaaactcaccaaccaaaggcctaccaatcttatcaatctaatgctcctagtcgcagg
agaggcaactatcaaccctccaaggtcaagatgcagtccctccatatgagtgatgaaaac
caggaactagtcaaggatatcttgagggaactacatggagcagacctggacctagacatg
ggactagaagactacgaagagcttgattatgataccgatcgtcacttctggactgatgac
aactccctgaaggtagaggcatctggttcaagctttacccctctcggtgtctggcatgag
gaagaggatgatagagaaaacaaagatgatacccaaaagatcagtaaatatgctgtggag
aaacttatcaggtgtggataccctaagaaagacagtctgcaagcattagaggataatgat
gcagatgcaggtttagcattggaacaactctacaaagattttttgaaaaatcactcgata
ttgtcagaacaagatgctgctgatgacagtgtcactaaagagtctctcatagaccagaga
caggaagaagcttttgctttgagctcaatatatgaatcagacttctctgagcgaatacct
aaccacgtctggacattgagactaaagctctctcacatcgataaatccctcaaggaagca
caaaagaatgaaaagaagaagtcagctgagaaggagagggaaaatcgtaggagaaaacag
aatctttgccatttctatcaggaaggtagctgtaggtttggatctcgatgcaagttcgtt
cacgaggccccttgggacactgaggatacagagtttgataagtttatggatgaggacaac
accaagtggtaccagttggaggtgcggtttcctagtgataacttgtacccatggcaacca
ccgattatcgcattttcatccacccatcccgacttccaatcagcgaagtgccttaacgtg
accaagcggctggccgaggagtccttggagcatgcatcgagtgggaacccagctgtgttt
agccttgttggtgtcctggaggatgaacaggagatgaggatattactagatggcaagcct
ctgccgtttcaggctaggaaactacctgcaaggactaaacttgttgtagaggatatagaa
gaagaatctcctgatggagaaacaccgctcaatgaacagtctgactcggcttcaggagct
acggtgggtgatgcagaggtgctgactggaagggaaggagcaaagaatcttggaagaact
ttgtatgttccaccaaagaggagtaaacgagatgaagaaagagacagtagaaggctgaag
gagcaattcaagaaggcccaaacaagcaatgcttacaagtcaatgctagagaggagagag
gctttacctgcctggaaagaacaggataacatcctaggcaccttgagcaagtaccaggtc
cttgtagtgagtggagctacagggtgtggaaagacaacccaagtgcctcagttcatcctt
gatgcctcccttcaaggtaaaggtttggatgtaagtaacatcatctgtacccaacccagg
aggatctcggccacagcagtagctgacagggtggccaaggagaggaccaccaggctagga
gatgttgtgggttaccagatcaggctagaaaataaacagtcttcttcgactcggctgatg
ttctgtacgacgggaatcttactcagaaggttggagagtgaccctgtcctcaacggagtc
tcccatatcatagtggatgaagtccatgagagaagtgaagagagtgatttcttaatgatg
gttctaagagacatgttgcctcagcgacctgacctccgcatcattctcatgagtgctacc
ctcaatgctgatctattctccagctatttctttgattgtcctgtcattaacatccctggt
aaaacctttccagtagaccaatacttcttggaagatgcaattgaatatactgggtatgtc
ctagatgagaattcacccctagcccggcctatcaagaaaagcaatgcggtaccttctgag
gcttcggccagagctatgagcaaggtcaggtgtgacaacctggatgaggagatagcagaa
gccttcgcttcaactacctttaaccctgccaaagataacgtgaaagatgctaatttgacg
ctgcagcagatggcactcagatataaagattatgagatgtctaccatcaagacattagct
actattgaccctgagaagattaacaatgacctgattgaagatctcatcaaatgggtagtt
gatggagatcatgattaccccaaggatggtgccatcttgatatttctaccaggactgggt
gaaatcactgatctctatgagcagcttcaaagctcactatgtggaccaagaaaaactaaa
aagtacaagctgatacccctccactcatccctctcgagcgaagaccaaaatgcagccttt
gataaaccaaaggaaggcatcactaagatcgtcatagcaaccaacatagccgagacatct
atcaccattgatgacattgtctttgttattgatgctggtagaatgaaagagaagcgatat
gactctggaaagagaatggagtcgttagagaccgtctgggtgtctagagccaatgccatg
cagcgtagaggtcgagcagggcgtgtgacggccggagtctgtttccacctcttctccaaa
cacacctttgagcatgtactcagggaacaacagttaccagagatccagcgtattccattg
gagcagcttgtactaaggattaaaatcctagatgtctttcaaggataccatgtcaaggaa
gtgttgaacaagttactagagcctcccaagacagagaatattgatgatgctgttcagagg
ctgcaagacttaggagctcttacaatagatcaggatctgacatctctgggctaccatctt
gcatctcttccagtagatgttaggatcggtaagctgatgctctttggagccatcttccag
tgccttgacccagtcctaaccatcgcagcaagtctcagctttagatcaccattcatggca
ccatttgacaaacgagaccaggcagataaaaagcgacaagagtttgctattggtaatagt
gatcacctgacactgttaagggcttacaagggttggaccacagcagttgaaagaagcaac
tacttcagctacaggttctgtcatgagaactttctttcagtcaaaacgctgcagatgatt
gccagcatgaagcatcagtttgcagagctccttggaggcattggtttcgttggccttgat
atgactggacgtcagatggacaggaggtcgaatggttacggagatatgatcatcaaggca
tgtgaccctcagatcaacgtgaatgccagcaatgaccggctggtcgtagcggttctttgt
gctgccctctatcctaatgtagtccaggtcctgaccccagaggccaaatacacccagtct
agtgcaggagctgttcctttgaatcccaaggcccaggaactcaaattcaagaccaaagat
gatggatatgtgagtgtccatccaaaatctgtcaacttccaagtgaggtacttcgagagc
ccatatcttgtcttcttggagaaaatcaaaacatcaaaggtatacatacgtgattgcagc
atggtgtctgtctatccgttactcctgtttgggggatgtgaactcaacattgacctcaag
ggaggagagttcatcatatcactcgacaatggatggattcagttccgggtcaagtctatc
gaggttggtgagctgatgagagagcttcggagagaacttgatcagctcctggccgataag
attcaacaacctgatatggatctaggaagttgcccaagaggaagccgaataattgcagtt
atcgttcaactcatcagcacacaatga
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integrated database retrieval system
