Lytechinus pictus (painted urchin): 129264796
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Entry
129264796 CDS
T09066
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04140
Autophagy - animal
lpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129264796
04148 Efferocytosis
129264796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129264796
Membrane trafficking [BR:
lpic04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
129264796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
Clathrin
TPR_Vps41
Beta-prop_WDR19_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
129264796
NCBI-ProteinID:
XP_054758715
LinkDB
All DBs
Position
7:35201946..35226552
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AA seq
827 aa
AA seq
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MHDAYEARPILEKLPLPIESIACHGDQLLVGTKPGHLLVYSITGGQLGTFKVDLLKSFKS
FSKKPIQQLECIPEMQIVISLSDAVINVHELNHFTSITSIAKTKGATLFSTYMQKVNIGG
GVQFTLKLCVAVKRKLQLFIWKNRTFEELKPDLGVPDVPKAMSWCENSLCVGFKRDYFLI
NIDNGQPKDLFTTGNASQAEPTVTKLSEDMLALGRDNMSIIIDSEGQPAKKYALTWSDIP
LVLEHDQPYIIAVLPKYVEVRTVDPRLLVQSIEVDKPKYITQGSGHVYVASNNFIWRLEP
VPLPRQIQQLVDDKQFELALHLAYMTDEVEADRQRRIQHIQNLYAFELFQQHRFEESMKM
FAKLGTDPAQVIGLFPDLLPKEYRQVLQYPSTPTELGGAELEKGLTALVEYLTQKRQDLA
KESSQQTAATPSTICEGSKIVTSRRQRSLIIDTTLLKCYLQTNDALVAPLLRLKDNNCHL
EESERVLKKYQKYSELIILYEKKDLHKKALDLLLRQSQKPNSSLKGHERTVSYLQRLGKE
HFNLICEYAQWVLKTYPEDGLKIFTEDIPEVEGLPRDQVLDYLTTVASNLSVPYLEHIIL
NCSDETPEFHNRLVNLYKDKIQVLMEDYRQTLPEGQSFVRAGTEPGELGAMRKKLLFFLE
TSQYYRPERLLTRFPFDSFFEERALLLGRLGRHEQALAVYAHILKDTRQAEEYCRRTAMI
SRESETDVYLSLFQTYIKPPDPESMRLMMQNTPAPEPNIKAALNVLEIHHDKIDTARALE
MLPDTIQVRDICGFLEKVMEGKAIQKRDSQVLKSLFYSENLQVRPSY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcttatgaggcacgtcctatcttggagaagcttcctctacctatagaatca
atagcctgccatggagatcaattgcttgtgggaacaaaaccaggacaccttctggtatac
agcatcacaggagggcaattgggtacatttaaagtggatctcctcaagtctttcaagtca
ttttctaagaagccaattcaacaactggaatgcattccggagatgcagattgtcattagt
ctttcagatgctgttattaacgtgcatgagctgaatcatttcacatcaatcacaagcatt
gccaaaaccaagggagctaccctattttctacatacatgcagaaagtgaatattggagga
ggtgtccagtttactttgaagctatgtgtagctgtcaaaagaaaactacaactattcatc
tggaaaaatagaacatttgaagaactcaagcctgatctaggagttcccgatgttccgaaa
gctatgtcatggtgtgaaaactccctctgtgttggcttcaaaagagactactttctcatc
aatattgacaatggtcagcccaaggatctgttcacaacaggtaatgcttctcaagctgaa
cccaccgtcaccaaactttctgaggacatgcttgccctgggaagggataacatgagtatt
atcatcgattcagagggacaaccagccaaaaaatatgcccttacttggtcagacattcca
ttagtattagaacatgaccagccatatatcattgctgtgcttccaaagtatgtagaagtg
agaactgttgacccaaggttactagtacagagtatagaagtagacaaaccaaagtacatt
acacaaggaagtggtcatgtgtatgtagcatctaataatttcatctggaggttagagcct
gttccattgccgagacagattcaacaactagtagatgacaaacagtttgaattagccctc
catcttgcttacatgacagatgaggtagaggctgatcgacagaggagaatacagcacatt
cagaacctatatgcctttgagctgtttcaacaacaccgctttgaagagtctatgaaaatg
tttgccaaactaggaacagatccagcgcaggtgatcggtctcttcccagaccttctaccc
aaggagtatagacaggtgttacagtaccccagcacacctacagagcttggtggagctgaa
ctagagaagggtctgactgccttggtagagtatctgacccagaagagacaagaccttgcc
aaggaatcctctcaacagactgcagccacgccttcaactatctgcgagggatcaaagata
gtaacttcaagaagacaaaggagtctcatcatcgacacaactctgctcaaatgctatcta
cagaccaacgatgccctagtagctccactacttagattgaaagataacaactgccatcta
gaggagagtgaaagggtactgaaaaaataccaaaagtacagtgaacttattattctctat
gagaagaaagaccttcataagaaagctttggacctgttactgcgtcaatcacaaaaacca
aacagttccctcaagggtcatgaaaggacagtatcctacctccaaaggctaggcaaagaa
cacttcaatctcatctgtgaatatgctcaatgggtgctcaaaacatatcctgaagatggg
ctaaagatattcaccgaggatattcctgaagtagaagggttaccgagggatcaagtcctg
gactacctgacgacagtagctagtaatctatctgtaccatacctagagcatatcatactc
aactgttcagacgagactccagaattccacaacaggcttgtcaatctctacaaagacaag
atacaggttcttatggaagactacagacagacacttccagaaggtcagtcatttgtcaga
gccggtaccgagcctggtgaactaggtgcaatgagaaagaagcttctcttcttccttgag
acgtcacaatattacagaccggagagactcctaactaggttcccttttgacagtttcttt
gaggagagagctctattgcttggtagattaggaagacacgagcaggctttagctgtctac
gcacatatactcaaggacacaagacaagctgaagagtactgtcgaagaacggccatgatc
agtcgagaaagtgaaacagatgtttatcttagtcttttccaaacgtacatcaaaccgcca
gacccagagtccatgcgattgatgatgcagaatacaccagctccggaaccaaacataaag
gctgccctcaatgtcctagaaattcatcatgacaagattgatactgccagggctcttgag
atgttacctgataccatccaagtgagagatatatgtggtttcctcgagaaggtgatggaa
ggaaaggccattcagaagagagatagtcaagtccttaagagtctcttctactcagaaaac
ttacaggtaagaccctcttattaa
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