Lytechinus pictus (painted urchin): 129265016
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Entry
129265016 CDS
T09066
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129265016
Spliceosome [BR:
lpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129265016
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_7
TPR_6
Mad3_BUB1_I
TPR_19
PPTA
Motif
Other DBs
NCBI-GeneID:
129265016
NCBI-ProteinID:
XP_054758969
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All DBs
Position
7:complement(47503806..47531554)
Genome browser
AA seq
808 aa
AA seq
DB search
MARGRRGRGRGGKAKVDENVGVADEAGNAEQEQVEDIVIDEFEVDENGEDDDGKIDDSIL
EEEEVEGGAIDDGADKSEAKEAKGDDVQPSEEMPMEIQEATKESEVEEKTEDKPAEQASE
KAAEKPAEEEKEAIQEEAMEDTKEKSSASEESKKEGGSRKRKKKERTRPYELEKYWKAVK
TNPADFTGWTYLLQYVEQEDYMPFYREAFDAFFKCYPYCYGYWKKYADSERKKGTIEKCW
EVFERGLKAIPLSSDLWLHYISVMGQHIPRSDETRADKLRALYERALAVAGMDFRSDKLW
DQYINFEKKEQKDWKRVMQLYDRILKIPTQLYRHHFDKLKEFIQAHLPKQYLDFDEFLNF
REQVVAEACTGDMDDDIPGEDAPPGEEAPPGEEGPPGVGPPSTKVIEGENKLIQEKVVES
RRAIFRKTEQEVSKRWAYEEAIRRPYFHAKPLEKGQLKTWREYLEFEESIGIHDRTVLLY
ERCLIACALYEEFWIKYARYMEKTGQEAASEVFKRACGTHLPSKPAINIQWAAFEEKYGN
IDRAREILEQLQTKQQDSVMIRLERINFERRAGNNDEVIKLYEGCIDDAKTATGQSFFAG
KLARFYQKILGDTDTAIKVLEKVLVQKQVSPVLKEQIYTLMMDVEYQRSPLNEEKMTAIF
DTVISSNVPQDVKIQFAQRKIQFLQDFGNNPAATHDAVDEHQKLVKNISSSKKRSADSSG
DAPSTPNTTSQTSNDTKAPEKKKAKTTNNQNDNNSSSSGYNYNSGYNYNQQSGGTATTTT
SAAAAANTGMGGAEMSWDSWGAWGAAQQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggggaagaagaggcagaggccgtggtgggaaagccaaagttgatgagaatgtg
ggtgtggctgatgaagctggcaatgcagaacaagaacaggttgaagacattgtcattgac
gagttcgaagttgacgaaaatggtgaagatgatgatggtaaaatcgatgattctatacta
gaagaagaggaagtagaaggaggagcgatagatgacggagctgacaaatctgaagcaaag
gaagccaaaggtgatgatgtccaaccgtcagaagaaatgccaatggaaatacaagaagcc
acaaaggaatccgaagtagaagagaaaacagaggataaaccagcagaacaggcatctgaa
aaagcagcagaaaagcctgctgaagaggaaaaggaagctatccaagaagaggctatggaa
gacacgaaagagaaatcatctgcaagtgaagaatctaagaaggaaggcggatcaaggaag
aggaagaagaaggaacgtaccagaccatatgagcttgagaaatactggaaggcagtgaag
acgaatcctgcagacttcactggttggacgtacctgctgcaatatgtggagcaagaggat
tacatgccattttaccgcgaagcttttgatgctttcttcaagtgctatccatattgttat
ggttactggaagaagtatgcagactccgagagaaagaagggtaccatcgagaagtgctgg
gaggtctttgagcgtggattgaaggctattcctctgagctctgatctctggctacattac
atcagtgtaatgggtcaacatattcctcggtcggatgaaaccagggctgacaagcttaga
gctttgtatgaaagggcacttgcagttgctggaatggacttcagatcagataaactttgg
gatcagtatatcaactttgagaagaaagaacagaaggattggaagagagtcatgcagctt
tatgatagaatcctcaagataccaacccaactatacagacatcactttgacaaactgaaa
gagtttatccaagcccatcttcccaagcagtacctggactttgatgagttcctgaacttt
cgtgaacaggtggtagcagaggcttgtacaggagatatggatgatgatatacctggtgaa
gatgctcctcctggagaggaagcaccccctggtgaagaaggacctccgggtgttggtcca
ccatctacaaaggtcatagagggagaaaacaagcttattcaagagaaagtagtagaatct
cgccgagccattttcaggaagactgaacaagaggtcagcaagcgttgggcctatgaagaa
gcaatccgtcgtccttacttccatgccaagccgctggagaagggacagctgaagacatgg
agggaatacttggaatttgaagaaagcattggtatccatgataggacagtactgctttat
gagagatgcctgattgcatgtgcactctatgaagagttctggatcaaatatgctcgttat
atggagaagacaggtcaggaagctgcatcagaagtattcaagagagcatgtgggacccat
ctaccatctaaaccagctattaacattcaatgggcagcatttgaagaaaaatatggaaac
attgatcgcgctagagagatccttgagcagcttcaaaccaagcagcaagattctgtcatg
atccgtttagaacgcatcaactttgaacgtagagctggcaataatgatgaggtcattaag
ctctacgagggttgcattgatgatgctaaaacagccaccggacagtctttctttgcagga
aagctagcaaggttttatcaaaagattctaggagatactgatactgccatcaaggtgctg
gagaaagtcttagttcaaaaacaggtgagtcctgtactgaaagagcagatttatacactg
atgatggatgtggaatatcaacggtcaccactcaatgaagagaaaatgactgccatcttt
gatacggtcatctcaagcaacgtacctcaagatgtcaagatacagtttgcacagcgcaag
atacagtttctacaggactttggtaacaaccctgcagcaacccatgatgctgtagatgaa
catcagaagttggtcaagaacatctcatctagcaagaaacgttcagcagattccagtggg
gatgccccttctacaccaaacaccaccagccagacgtcgaatgataccaaggcaccggag
aagaagaaagctaagacaaccaacaaccagaatgataacaattcaagtagttcagggtat
aactacaacagtggatataactataaccagcagtctggaggaacagcaacaacaacaaca
tcagcagcagcagcagctaacacaggaatggggggagctgaaatgagctgggatagctgg
ggtgcctggggtgctgcccaacaataa
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