Lytechinus pictus (painted urchin): 129265505
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Entry
129265505 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129265505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129265505
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129265505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
129265505
NCBI-ProteinID:
XP_054759471
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Position
1:34682492..34733934
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AA seq
1359 aa
AA seq
DB search
MATLFSYFTKIPGKKTDKTSPKAGDKAETDKPVSPQESAKEKISSKSVFTNGHQTFTPGD
LVWARLEGYPWWPSLVCNHPTLQKCTKKDGKRGLVHVQFFDDPPSRAWISDKLVDPYRGS
QAKECQFGCKFHTTKPDVRRGMDQADEALKKEREERMKLVVCHVPSEDEDEEEEEEDEME
IEDASDGSASEDNITSSKRKPRAAAKKAMSTQKKKRRRIMVASDSDSSGDEFKPESDDES
EGAESSGVDEDDISGPETESDPETPKKAKKRKRGSTSTVTPSTLLDEKKSLLSIILSHYQ
HGLTKGSKXLTPSSMARPDSATPPPKKTFGTPSVSSSTKAKLSAFQSPSPSPSPTPASES
DEARFPHQRQEWLKPGKRKDIKGRPEHDPEYDPSTLFVPKTFLDKCTPAMRQWWEMKSKY
YNAVLFFKMGKFYELYHMDAEVAVKELGLIYMKGENAHSGFPEIAFSRYSDTLIQKGYRV
ARVEQTETPDMMQERIKNMSRSVTKFDKVVKREICRISTQATRTYNFIDGDTCEAQSSYL
LAVTERQSDGSFGGESVYGVCFVETSIGKFYIGQFEDDRHSSRFRTLIAHYPPSQVLFER
GKLLGKTQQLLSSNLMSVLKDSLLPGSEFWDAAKTLKVLKEKDYFEDSERDKDEEEKERL
NCWPDELKEMLSDVKCEIPTLGACRYLKKCCLEQELLSMRNFEVYKPLDAEPTKPSSTLP
TFTSKQHMVLDSITLSNLDIIENSSTGTKEGTLLETLDRCRTPFGKRLFKQWLCTPLCNP
KSISDRLDAIEDIHNNPDIVGEVAELIKKLPDLERLLSKIHTLGSSKRNSDHPDSRAIFF
EDAVYSKRKISDFITALDGFESGLKVVKLFKKAVPDFRSSLLKACVSLKLTGGKYPDYAD
TLEFFETAFDQKKAKEKGAIIPCKGVIPEYDNAISDMADTKDRLQEYLEKQKKRLGCKNI
VYWGTAKNRFQMEIPESALSRHIPEEYELQSSKKGYKRYWSPTIQKLLADMMNAEDRRDA
ALKDSMRRVFHKFDEHYKSWDAAVQCLSVLDVLMSFADYSQSADGNMCRPDIILPSESDQ
PYIDIVEGRHPCIAHTFAGGDYIPNDTFIGIKNENEMDDGEGNHGNSSCILVTGPNMGGK
STLMRQAGLIVVMAQLGCYVPAEGCRLTPVDRVFTRLGARDNILSGESTFFVELSETASI
LKHASKHSLVLMDELGRGTATYDGTAIATAVVKELSEVVGCRTLFSTHYHSLVEDFSHDP
NIRLGHMACMVENENEEDPSQETITFLYKFVGGACPKSYGFNAARLADIPDEIIQVARRK
AKEFEESAERIKSFRSIHKMCGTSSKLDITKFKQMVARV
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttattctcgtattttaccaagataccaggtaaaaagacagataaaacatca
cccaaagcaggggacaaggcagaaacagataaacccgtttcacctcaagagagtgcaaag
gaaaaaatatcgtcaaaatctgtttttacaaatggacaccagacgtttacccctggagat
ctggtctgggccagactggaaggatatccctggtggcccagccttgtttgcaaccacccc
accctccagaaatgcaccaagaaggatggcaagcgagggctcgtccatgtccagttcttt
gatgacccacctagtcgtgcctggatcagtgacaaacttgtagacccctacagagggagc
caggccaaggaatgccagtttggctgcaagttccataccaccaaaccagatgtgaggagg
ggaatggatcaagccgatgaggcactcaagaaagaaagggaggaaaggatgaaactcgtc
gtctgccatgttccatcagaagatgaagatgaggaggaggaggaggaggacgagatggag
attgaagatgcaagtgatggcagtgcaagtgaagacaacatcacaagcagtaaaagaaag
ccaagagcagctgctaagaaagccatgagcacacagaagaagaaacgaaggagaatcatg
gttgcctctgacagtgatagttcaggagatgaattcaaacctgaaagtgatgatgaatct
gaaggagccgagagcagtggagtggatgaagatgacatctcaggacctgagacggagtca
gaccctgaaacaccaaagaaagctaaaaagcgaaagaggggttccacttcaactgtcact
ccttccaccctcctcgacgaaaaaaagagcctgctttcaattattttatctcattatcaa
catggccttacgaaggggtcgaagntactaactccatcttctatggcacgcccagattcg
gctaccccaccccctaagaagacgtttggcacaccgtctgtcagctcgtccaccaaagct
aagctctctgcattccagtctccttccccttctccgtctccaacccctgcatctgaatca
gacgaagcacgctttccacatcagcgacaagaatggcttaaaccaggcaaaagaaaagac
atcaaaggcagaccagagcatgacccagaatatgatcccagtactctcttcgtgccaaag
actttcttggataaatgcactcctgctatgagacaatggtgggagatgaaatccaagtat
tataatgctgttcttttctttaagatgggaaaattctatgagctgtatcacatggatgca
gaggtagccgtcaaagagcttggactcatctacatgaagggagagaatgcacattccggc
ttccctgagatagcgtttagtcggtacagtgatacgctaatccagaaggggtaccgtgtt
gctcgtgtggaacagacggagaccccagatatgatgcaggaaagaataaaaaacatgagc
agatctgtaacaaaatttgacaaagttgtcaagagagagatatgcaggatttcaactcaa
gcgacaagaacctataactttatagatggtgatacatgtgaggcacagagcagctatctt
cttgcagtcactgagaggcagagtgacgggagcttcggtggggagagtgtctatggtgta
tgctttgtggaaacatccattggcaaattctatattggtcagtttgaggatgaccgtcat
agttctagattcaggacactgatagctcactatcccccttcccaggttttgtttgaacgc
ggcaagctcctcgggaagacccagcagctcctgtccagtaacctgatgtccgtcctcaaa
gactctctccttcctggatctgagttctgggatgctgctaagacactgaaggtactcaag
gagaaggattactttgaggatagcgagagagacaaggatgaagaggagaaggaaagactg
aactgctggccagatgaactgaaagagatgctgtcagatgtcaaatgtgagatccctacc
cttggggcatgtcggtacctcaagaagtgctgtctggagcaggagctgttgtccatgagg
aactttgaggtgtacaaacctctagatgcagagcccaccaaaccctcctcaaccctccca
accttcacatctaaacaacacatggtcctagacagtataacactgagcaacctagacatc
attgagaatagcagcaccgggacaaaagagggcaccctactggagactctagatcgctgt
cggacaccatttgggaagaggctgttcaaacaatggctctgcacccctctgtgcaatccg
aaatctatcagtgatagactggatgccattgaagatatccataataacccagacattgta
ggagaagttgcggaactcatcaaaaagctgcctgatcttgaaagactactcagcaagatc
catactcttggttcatccaagaggaactcggaccatccagacagcagagccattttcttt
gaagatgcagtgtatagtaaacgtaagatcagtgacttcatcactgcactagatggcttt
gagagtggtctcaaggtcgttaaactcttcaagaaagctgtgccagattttaggtcatca
ttactaaaggcttgtgtatctctgaagttgactggaggcaagtaccctgactatgcggac
accttggagttctttgagactgcgtttgatcagaagaaagcaaaggaaaaaggagccatc
atcccatgtaagggtgtcatcccagaatatgacaatgccatctccgacatggctgacacc
aaggacaggctccaggagtacttggagaaacagaaaaagaggcttggctgcaagaacatt
gtctactggggcacggccaagaaccgattccaaatggagatcccggagtctgccctctct
cgccatattcccgaagagtatgagctccagtcctccaagaagggttacaaacgctactgg
tctccgacgattcagaagctgctagcggacatgatgaacgcagaggacaggcgagatgct
gccctcaaagactcaatgaggagagtctttcataaatttgatgagcactacaagtcctgg
gatgctgctgtccagtgcctctcagttcttgatgtcttgatgagctttgctgattatagc
cagtctgcagatggcaacatgtgtagacccgacatcatactgccctctgagagtgaccag
ccgtacatcgatattgtagaagggcgtcatccttgcatagcacataccttcgctggaggg
gactacatccctaacgacacatttataggcattaaaaatgagaatgagatggatgatgga
gagggtaaccatggcaacagcagctgtatcctggtgacgggacccaacatgggtggcaag
tcaaccctgatgagacaggcggggctgattgtcgtcatggcgcagcttggatgctacgtc
cctgcagagggttgtagactgacaccggtagacagggtctttacaaggcttggtgcaaga
gataacattttatcaggtgagagcaccttctttgtggagctcagtgagacggccagcatc
ctcaaacacgcctccaagcattccctcgttctcatggatgagttagggcggggcacggca
acgtacgacggcacagccatagcaacggccgtcgtgaaggaactttccgaggtggttgga
tgtaggacactcttctcaacccactatcattccctagtggaagacttctctcatgacccg
aacatcaggctaggtcacatggcgtgtatggttgagaatgaaaatgaagaagacccctca
caggaaaccatcacgttcctctacaagtttgtgggaggggcttgtccaaaaagctacggt
ttcaatgccgcccgattggctgacataccagatgagattattcaggttgctcgtcggaaa
gccaaggagtttgaggagtcggccgagcgaattaaatccttccgttctattcacaagatg
tgcggaacatcttccaagcttgatatcaccaaattcaagcaaatggtggcacgagtatga
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