Lytechinus pictus (painted urchin): 129265686
Help
Entry
129265686 CDS
T09066
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03022
Basal transcription factors
lpic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129265686
09124 Replication and repair
03420 Nucleotide excision repair
129265686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129265686
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129265686
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129265686
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129265686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_6
zf-RING_4
zf-P11
zf-RING_2
Trm112p
DUF2730
DUF6477
DNA_ligase_ZBD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
129265686
NCBI-ProteinID:
XP_054759625
LinkDB
All DBs
Position
7:5304786..5314313
Genome browser
AA seq
326 aa
AA seq
DB search
MDEQMCPRCKTTKYRNPSLKLMVNVCGHTLCDNCVELLFVRGAGTCPECKTPLRRNQFRV
QLFEDSIIEKEVDIRRRVMKDFNKQEGDFQTLREYNDYLEDIEHIVYNLTNGVDMEATRK
KIENYRRENKELITKNRQMKSHDMMYLDALLEEEQQIKEERKQEYKFLEKQSLNQKKRNK
EALLDELIYSDRPADQVIASHVSIQQNQEAPTYKAPPKKAIEVSSGARLGVGFQDNFLPI
PKIEEIPYEYMEVEVYTFGPEAPSTQEELTSNGYVRHIRSASPSGVGGGYKEHMACQRAV
EEAFSGLFFFPFRHNKHIDPLGIETS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaatgtgtccacgatgtaaaacaacgaaatatcggaacccatcgctgaaa
ctcatggtgaatgtgtgtgggcatacactatgtgataactgtgttgagctgttatttgta
cgaggagcagggacgtgtcccgagtgtaaaacacctctgaggagaaaccagtttcgagta
caactctttgaagattcaatcattgaaaaggaagtggacatcaggaggagagtgatgaaa
gacttcaacaaacaggaaggtgacttccagacattgagagaatataatgattatttagaa
gacatagagcatattgtttataatctgaccaatggagtagatatggaagccaccaggaag
aagattgaaaactacagaagagagaacaaagaattgatcaccaagaacaggcagatgaag
agtcatgatatgatgtacttagatgccctgttggaggaggaacaacaaatcaaagaagaa
aggaaacaggaatacaaattcctggagaagcagagtcttaatcagaagaagagaaacaaa
gaagccctcttagatgagctgatctattcagatcggccagcagaccaggtgatagcgagc
catgtttctattcagcagaaccaagaggctcctacgtataaagctcctcccaagaaagca
atcgaagtctcatcgggagcaagactgggtgttggattccaagataacttcttacccata
cccaagatagaggagataccttatgaatatatggaagtagaggtttatacgtttggaccg
gaagcaccgagcacacaagaagagttaacatccaatgggtatgtgaggcacatccgttct
gcgtcgccctctggtgttgggggaggctacaaggagcacatggcgtgtcagagagccgta
gaggaggctttctctggactcttcttcttcccgttcagacacaataaacatatcgatcct
ctgggaattgaaacgagctga
DBGET
integrated database retrieval system
